Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome-wide identification of microRNA targets during mouse liver development using Ago HITS-CLIP

ABSTRACT: Genome-wide identification of microRNA targets during mouse liver development using Ago HITS-CLIP

PROVIDER: PRJNA644387 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12158335.fastq.gz	Fastqsanger.gz
	SRR12158336.fastq.gz	Fastqsanger.gz
	SRR12158337.fastq.gz	Fastqsanger.gz
	SRR12158338.fastq.gz	Fastqsanger.gz
	SRR12158339.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Genome-wide identification of microRNA targets during mouse liver development using Ago HITS-CLIP

Project description:By using Ago HITS-CLIP, we report genome-wide identification of microRNA-target interactions from e12.5, e15.5, e18.5, P7(postnatal day 7) and adult liver,

2021-07-01 | GSE153876 | GEO

Camk2a-neuron specific FLAG-Ago HITS-CLIP

Project description:The HITS-CLIP procedure was used to detect miRNA mediated Argonaute (Ago) binding in Camk2a mouse neurons.

2023-01-31 | GSE211552 | GEO

Camk2a-neuron specific FLAG-Ago HITS-CLIP

Project description:Camk2a-neuron specific FLAG-Ago HITS-CLIP

| PRJNA870889 | ENA

Ago HITS-CLIP in KSHV-infected primary effusion lymphoma (PEL) cell lines BCBL-1 and BC-3

Project description:We performed Ago HITS-CLIP to identify targets of viral and human miRNAs in latently KSHV-infected PEL cells Ago HITS-CLIP was performed in two latently infected PEL cell lines, BCBL-1 and BC-3; Argonaute-immunoprecipitation of UV cross-linked Ago-miRNA-mRNA complexes, followed by RNA isolation, library construction, and high-throughput sequencing (Illumina GAxII); we performed 3 biological replicates for each cell line, two technical (sequencing) replicates of BCBL-1 biological replicate 1

2012-10-05 | E-GEOD-41357 | biostudies-arrayexpress

Ago HITS-CLIP in KSHV-infected primary effusion lymphoma (PEL) cell lines BCBL-1 and BC-3

Project description:We performed Ago HITS-CLIP to identify targets of viral and human miRNAs in latently KSHV-infected PEL cells

2012-10-05 | GSE41357 | GEO

Elavl HITS-CLIP

Project description:Elavl HITS-CLIP

| PRJNA407981 | ENA

SRSF1 HITS-CLIP

Project description:SRSF1 HITS-CLIP

| PRJNA541847 | ENA

HITS-CLIP of SMN

Project description:We performed HITS-CLIP to determine cellular RNA targets of the SMN protein. Three replicates were performed in SH-SY5Y cells.

2018-08-01 | GSE110411 | GEO

AGO CLIP reveals an activated network for acute regulation of brain glutamate homeostasis in ischemic stroke [dataset 7]

Project description:In vivo microRNA-target interactions from adult mouse cortex were identified with CLEAR-CLIP, a modified AGO HITS-CLIP approach that allows direct ligation of microRNA and target within purified, endogenous AGO-RNA complexes.

2019-06-14 | GSE104051 | GEO

HITS-CLIP of SMN

Project description:HITS-CLIP of SMN

| PRJNA433653 | ENA