Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Global gene networks of canine monocyte-derived macrophages infected with Mycobacterium intracellulare

ABSTRACT: Global gene networks of canine monocyte-derived macrophages infected with Mycobacterium intracellulare

PROVIDER: PRJNA665203 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12697516.fastq.gz	Fastqsanger.gz
	SRR12697517.fastq.gz	Fastqsanger.gz
	SRR12697518.fastq.gz	Fastqsanger.gz
	SRR12697519.fastq.gz	Fastqsanger.gz
	SRR12697520.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 16

Similar Datasets

Global gene networks of canine monocyte-derived macrophages infected with Mycobacterium intracellulare

Project description:An opportunistic intracellular pathogen Mycobacterium intracellulare, a member of the nontuberculous mycobacteria (NTM) cluster, causes respiratory disease in immunosuppressed hosts, including companion dogs. The purpose of this study is to investigate a host-M.intracellulare interactome in canine monocyte-derived macrophages during the infection.

2020-09-24 | GSE158425 | GEO

Global gene networks in canine peripheral blood mononuclear cells infected with Mycobacterium avium subsp.hominissuis

Project description:An opportunistic intracellular pathogen Mycobacterium avium subsp. hominissuis, a member of the nontuberculous mycobacteria (NTM) cluster, causes respiratory disease in immunosuppressed hosts. In particular, infected companion dogs are a potential role to transmit the agent to children or immunosuppressed people. The purpose of this study is to investigate a host-M. avium hominissuis interactome in canine PBMCs during the infection.

2019-06-27 | GSE133326 | GEO

Global gene networks in canine peripheral blood mononuclear cells infected with Mycobacterium avium subsp.hominissuis

Project description:Global gene networks in canine peripheral blood mononuclear cells infected with Mycobacterium avium subsp.hominissuis

| PRJNA551125 | ENA

Mycobacterium intracellulare

Project description:Mycobacterium intracellulare overview

| PRJNA36809 | ENA

Data-dependent acquisition based proteomic analysis of Mycobacterium intracellulare ATCC 13950

Project description:Detection of species-specific proteotypic peptides for accurate and easy characterization of infectious non-tuberculous mycobacteria such as Mycobacterium intracellulare is essential. Therefore, we carried out an in-depth global proteomic experiment using M. intracellulare ATCC 13950 strain followed by proteome database search and spectral library generation. The lysate was subjected to in-solution proteomic sample preparation and fractionated using an off-line C18 StageTip. Each fraction was acquired in technical triplicates using a 180 min data-dependent acquisition (DDA) method in Orbitrap Fusion Tribrid (Thermo Scientific) mass spectrometer. The resulting raw DDA data were searched against the M. intracellulare proteome database using Proteome Discoverer and FragPipe. The resulting peptide spectrum matches were converted into a spectral library using BiblioSpec.

2024-03-07 | PXD040549 | Pride

MicroRNAs are amplifiers of monocyte inflammatory networks and repressors of metabolism

Project description:MicroRNAs are amplifiers of monocyte inflammatory networks and repressors of metabolism Milk and blood isolated CD14+ monocyte cells taken from 5 infected Holstein friesians and 5 control Holstein friesians. Five animal infected with live S. uberis, cells extracted at 0, 12, 24, 36, and 48 hours post infection.

2014-07-03 | E-GEOD-51848 | biostudies-arrayexpress

MicroRNAs are amplifiers of monocyte inflammatory networks and repressors of metabolism

Project description:MicroRNAs are amplifiers of monocyte inflammatory networks and repressors of metabolism

2014-07-03 | GSE51848 | GEO

Canine Polarized Macrophages Express Distinct Functional and Transcriptomic Profiles

Project description:in the present study we investigate polarized canine macrophages using transcriptome sequencing, a larger panel of flow cytometry markers, and antimicrobial functional assays. Transcriptome analysis of primary canine monocyte-derived macrophages revealed unique, previously unreported signatures for polarized M1 and M2 macrophages.

2022-09-30 | GSE207661 | GEO

Mycobacterium intracellulare subsp. intracellulare strain:S-24

Project description:Mycobacterium intracellulare subsp. intracellulare strain:S-24 Genome sequencing and assembly

| PRJNA795287 | ENA

Mycobacterium intracellulare

Project description:Mycobacterium intracellulare Raw sequence reads

| PRJNA506060 | ENA