Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Bacterial community dynamics during a harmful algal bloom of Heterosigma akashiwo

PROVIDER: PRJNA669545 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12841125_1.fastq.gz	Fastqsanger.gz
	SRR12841125_2.fastq.gz	Fastqsanger.gz
	SRR12841126_1.fastq.gz	Fastqsanger.gz
	SRR12841126_2.fastq.gz	Fastqsanger.gz
	SRR12841127_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 40

Similar Datasets

Project description:The mechanisms underlying the action of algicidal bacteria Pseudalteromonas sp. LD-B1 against harmful algal bloom species Heterosigma akashiwo

| PRJNA1031792 | ENA

Ocean warming and acidification affect the transitional C:N:P ratio and macromolecular accumulation in the harmful raphidophyte Heterosigma akashiwo

Project description:We used single cell RNA-seq to comprehensively map raphidophyte Heterosigma akashiwo to grow under present and future ocean conditions. We unveiled several unique types of metabolic changes, signaling pathways, and regulons associated with these cells.

2023-01-20 | GSE223198 | GEO

Alpha-glucans from bacterial necromass indicate an intra-population loop within the marine carbon cycle

Project description:Phytoplankton blooms provoke bacterioplankton blooms, from which bacterial biomass (necromass) is released via increased zooplankton grazing and viral lysis. While bacterial consumption of algal biomass during blooms is wellstudied, little is known about the concurrent recycling of these substantial amounts of bacterial necromass. We demonstrate that bacterial biomass, such as bacterial alpha-glucan storage polysaccharides, generated from the consumption of algal organic matter, is reused and thus itself a major bacterial carbon source in vitro and during a diatom-dominated bloom. We highlight conserved enzymes and binding proteins of dominant bloom-responder clades that are presumably involved in the recycling of bacterial alpha-glucan by members of the bacterial community. We furthermore demonstrate that the corresponding protein machineries can be specifically induced by extracted alpha-glucan-rich bacterial polysaccharide extracts. This recycling of bacterial necromass likely constitutes a large-scale intra-population energy conservation mechanism that keeps substantial amounts of carbon in a dedicated part of the microbial loop.

2024-05-14 | PXD043390 | Pride

Heterosigma akashiwo strain:H93616

Project description:Heterosigma akashiwo transcriptome

| PRJDB15108 | ENA

Heterosigma akashiwo

Project description:Heterosigma akashiwo overview

| PRJNA81413 | ENA

Project description:Transcriptome response of Meretrix meretrix to the harmful algae Heterosigma akashiwo

| PRJNA860230 | ENA

marine metagenome

Project description:Metatranscriptome profiling of a harmful algal bloom.

| PRJNA241185 | ENA