Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Transcriptional response of Corynebacterium glutamicum C1 to 3 mM indole-alanine dipeptide

ABSTRACT: Transcriptional response of Corynebacterium glutamicum C1 to 3 mM indole-alanine dipeptide

PROVIDER: PRJNA670724 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR12880326_1.fastq.gz	Fastqsanger.gz
	SRR12880326_2.fastq.gz	Fastqsanger.gz
	SRR12880327_1.fastq.gz	Fastqsanger.gz
	SRR12880327_2.fastq.gz	Fastqsanger.gz
	SRR12880328_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 24

Similar Datasets

Transcriptional response of Corynebacterium glutamicum C1 to 3 mM indole-alanine dipeptide

Project description:Differential gene expression analysis of C. glutamicum C1 in presence of 3 mM indole-alanine dipeptide compared to control conditions without indole-alanine dipeptide. C. glutamicum C1 cells were cultivated in CGXII minimal medium with 40 g per litre glucose in presence or absence of 3 mM indole-alanine dipeptide and harvested during exponential phase (o.d.600 6).

2020-12-31 | GSE159888 | GEO

Transcriptional response of Corynebacterium glutamicum ATCC 13032 to 2.5 mM indole

Project description:Differential gene expression analysis of C. glutamicum ATCC 13032 in presence of 2.5 mM indole compared to control conditions without indole. C. glutamicum ATCC 13032 cells were cultivated in CGXII minimal medium with 40 g per litre glucose in presence of 2.5 mM indole and harvested during exponential phase (o.d.600 4).

2020-12-31 | GSE159887 | GEO

Comparison of Corynebacterium glutamicum chassis C1 with MB001

Project description:To identify genes which are differentially expressed in Corynebacterium glutamicum chassis C1 in comparison to the prophage free strain MB001, we performed DNA microarray analyses of C. glutamicum C1 against MB001. For this purpose RNA was isolated from cells cultivated in CGXII minimal medium with 2% glucose (w v-1) and harvested in the exponential growth phase at an OD600 of 5. Four biological replicates were performed.

2017-08-23 | GSE88717 | GEO

Transcriptional response of Corynebacterium glutamicum ATCC 13032 to 2.5 mM indole

Project description:Transcriptional response of Corynebacterium glutamicum ATCC 13032 to 2.5 mM indole

| PRJNA670725 | ENA

Corynebacterium glutamicum strain:C1

Project description:Corynebacterium glutamicum C1 Genome sequencing and assembly

| PRJNA350501 | ENA

Single Cell RNA-seq data of C1-sgControl, C1-sgEED and C1-sgKMT2D cells

Project description:Analysis of gene expression patterns at single cell level of C1-sgControl, C1-sgEED and C1-sgKMT2D cells.

2022-04-26 | GSE201441 | GEO

Effect of d-alanine

Project description:Effect of d-alanine

| PRJNA946752 | ENA

Kentucky assay: Indole

Project description:Kentucky assay: Indole

| PRJNA610533 | ENA

Salmonella wild type in LB, 2mM indole until OD1 and 2mM indole for 15 minutes

Project description:Transcriptional profiling of Salmonella Typhimurium SL1344 wild type grown to OD600=1 in LB alone or in LB supplemented with 2mM Indole, or with 2mM indole for 15 min (called shock). The goal is to determine Salmonella response to indole at different time points.

2013-01-30 | GSE39760 | GEO

Pseudomonas putida KT2440 : Control vs. indole or ampicillin or indole plus ampicillin treated

Project description:Transcriptional profiling of P. putida KT2440 cells comparing untreated cells with 1 mM indole or 50 μg/ml ampicillin or 1 mM indole plus 50 μg/ml ampicillin treated cells

2016-09-10 | GSE86617 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data