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Pseudoalteromonas arabiensis

ABSTRACT: Pseudoalteromonas arabiensis overview

PROVIDER: PRJNA673270 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
	LRUF01.dat.gz	Other
	LRUF01.fasta.gz	Fasta.gz
	LRUF01.master.dat	Other

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Project description:Illumina HiSeq 2500 technology was used to sequence the transcriptome of three Ethiopian field populations of An. arabiensis (Asendabo (ASN), Chewaka (CHW) and Tolay (TOL)) and two An. arabiensis strains (Sekoru (SEK, from Ethiopia) and Moz (MOZ, from Mozambique)). Both ASN, CHW and TOL were previously shown to be resistant against delamethrin and DDT, while the two An. arabiensis strains (SEK and MOZ) were both susceptible to deltamethrin and DDT (Alemayehu et al. 2017, DOI: 10.1186/s13071-017-2342-y; Witzig et al. 2013, DOI: 10.1038/hdy.2012.112). Differentially expressed genes (absolute fold change (FC) ≥ 2 and Benjamini-Hochberg adjusted p-value < 0.05) were determined between each insecticide resistant field population (ASN, CHW or TOL) and one of the insecticide susceptible strains (SEK or MOZ).

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Project description:The transcriptional profile of Anopheles arabiensis collected from a pyrethroid resistant area on Pemba Island collected in 2011 was compared to that of a lab susceptible colony of Anopheles arabiensis (MOZ).

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