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Gallus gallus

ABSTRACT: RNAseq sequence reads of spleen of chickens infected with Newcastle disease virus

PROVIDER: PRJNA675698 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR13021942_1.fastq.gz	Fastqsanger.gz
	SRR13021942_2.fastq.gz	Fastqsanger.gz
	SRR13021943_1.fastq.gz	Fastqsanger.gz
	SRR13021943_2.fastq.gz	Fastqsanger.gz
	SRR13021944_1.fastq.gz	Fastqsanger.gz

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Expression data of spleens from chickens infected with different Newcastle Disease Viruses

Project description:Genotype VIId NDV is characterized by severe tissue damage in chicken lymphoid organs compared to other virulent strains. However, biological basis of this unusual pathological phenotype is unknown. Host response is associated with pathogenicity of Newcastle Disease Virus (NDV). We aim to determine the contribution of host response to the severe tissue destruction in the lymphoid system caused by genotype VIId NDV. We used microarray analysis to evaluate the global transcriptional response in the spleen of chickens infected with genotype VIId NDV strain JS5/05 and genotype IV NDV Herts/33. Chickens were inoculated with JS5/05 or Herts/33 or mock-infected. At day 2 post infection, spleens were isolated from three chickens per group for RNA extraction and hybridization on Affymetrix microarrays. Samples were named as follows: JS5/05 (I4_1_NS,I4_2_NS,I4_3_NS), Herts/33 (H1_NS,H2_NS, H3_NS), control (C1_NS, C2_NS, C3_NS).

2012-08-14 | E-GEOD-40100 | biostudies-arrayexpress

Gallus gallus

Project description:Expression data of spleens from chickens infected with different Newcastle Disease Viruses

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Expression data of spleens from chickens infected with different Newcastle Disease Viruses

2012-08-15 | GSE40100 | GEO

Gene expression analysis of chickens (Gallus gallus) infected with recombinant influenza viruses

Project description:H5N1 subtype highly pathogenic avian influenza virus has been spreading to Asia, Eurasia and African coutries. An original or six of recombinant H5N1 subtype influenza viruses with varying survivability were infected to chickens for elucidating genes correlated with pathogenicity. Two chickens were infected with each 10^6EID50/ head virus intranasally, and their lung was collected from infected chicken at 24 hours after infection.

2012-03-30 | E-GEOD-32378 | biostudies-arrayexpress

Gene expression analysis of chickens (Gallus gallus) infected with recombinant influenza viruses

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Gallus gallus strain:Komarov

Project description:Host and Newcastle disease virus transcriptomics of NDV infected DF1 cells

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Project description:Newcastle Disease virus infection in chickens

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Project description:Genome profiles of chickens infected with infectious bursal disease virus by RNA-seq

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Gallus gallus

Project description:microRNA profiling in Marek's disease virus induced lymphoma and infected spleen by deep sequencing

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Comparative analysis of Gallus gallus cecal epithelia following Eimeria tenella infection

Project description:Relative expression levels of mRNAs in chicken cecal epithelia experimentally infected with Eimeria tenella were measured at 4.5 days post-infection. Two weeks old chickens were uninfected (negative control) or were orally inoculated with sporulated oocysts of Eimeria tenella. Cecal epithelia samples were collected from >12 birds in infected or uninfected group at 4.5 d following infections, in which samples from 4 birds were pooled together to form a total 3 biological replicates in each group. Parasite merozoites were also collected from four infected chickens at 5 d after infections. Uninfected control samples, merozoites and infection group samples were selected for RNA extraction and hybridization on Affymetrix microarrays. We used Affymetrix GeneChip chicken genome arrays to detail the chicken cecal epithelia gene expression in the control and E. tenella-infected birds.

2012-12-10 | GSE39602 | GEO

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