Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Adenovirus type 2 transcriptome

PROVIDER: PRJNA678228 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13052884_1.fastq.gz	Fastqsanger.gz
	SRR13052885_1.fastq.gz	Fastqsanger.gz
	SRR13052886_1.fastq.gz	Fastqsanger.gz
	SRR13052887_1.fastq.gz	Fastqsanger.gz
	SRR13052888_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Co-hybridization of Adenovirus type 40 and 41

Project description:Co-hybridization of Adenovirus type 40 and 41 to test probe specificity for closely related viral targets. ATCC strains of Adenovirus type 40 and 41 were hybridized to the array as a control run and a proof of concept. Degree of cross hybridization between polio nucleic acid and non-adenovirus 40 and 41 probes was evaluated. Specificity of the probe design was determined between closely related members of the same virus family. Keywords: control study: target detection and specificity

2008-02-28 | GSE10569 | GEO

Project description:Human Adenovirus type 41 detected in wastewater

| PRJNA885073 | ENA

Project description:Adenovirus type 4 vaccine virus and tablets

| PRJNA961906 | ENA

Project description:Novel human adenovirus type HAdV-D116 sequencing

| PRJNA1184469 | ENA

Human normal oral keratinocytes (NOK) siRNA and Human epidermal keratinocytes (HEK) overexpression RNA-Seq

Project description:Transcriptome of si-RNA transfected NOK cells and adenovirus-transduced HEK cells

2018-08-07 | GSE97616 | GEO

JNK-dependent genes_rVSMC

Project description:Oxidative stress-dependent genes are defined as those induced or suppressed by H2O2 treatement in rat vascular smooth muscle cells. JNK-induced genes in rat vascular smooth muscle cells are defined as those induced by adenoviruses encoding constitutively active MKK7 (caMKK7) + wild type JNK1 (wtJNK1) and suppressed by adenovirus encoding dominant negative JNK1 (APF). JNK-suppressed genes in rat vascular smooth muscle cells are defined as those suppressed by adenoviruses encoding constitutively active MKK7 (caMKK7) + wild type JNK1 (wtJNK1) and induced by adenovirus encoding dominant negative JNK1 (APF). Adenovirus encoding nuclear localizing GFP was used as a control. Keywords = vascular smooth muscle Keywords = hydrogen peroxide Keywords = c-Jun N-terminal kinase Keywords = JNK Keywords = adenovirus Keywords = oxidative stress Keywords: repeat sample

2005-11-09 | GSE2190 | GEO

Co-hybridization of Adenovirus type 40 and 41

2010-05-26 | E-GEOD-10569 | biostudies-arrayexpress

A new look at adenovirus splicing

Project description:Adenovirus type 2 RNA splicing sites were mapped by using deep cDNA sequencing. The majority of the previously identified splice sites were detected. In addition, novel splicing sites were identified Total RNA obtained from four time stages of human primary lung fibroblast cells IMR-90 infected by adenovirus type 2 compared to the control mock-infected by adenovirus type 2.

2014-03-25 | E-GEOD-54583 | biostudies-arrayexpress

Co-hybridization of Adenovirus type 40 and 41

Project description:Co-hybridization of Adenovirus type 40 and 41

| PRJNA107825 | ENA

Regnase-1 overexpression/knockdown effect on primary mouse articular chondrocytes

Project description:Gene expression profiling of primary mouse articular chondrocyte infected with recombinant adenovirus expression mouse Regnase-1 or recombinant adenovirus expressing mouse small hairpin RNA of Regnase-1. In this study, we have attempted to explore the effects of Regnase-1 overexpression or knockdown on mouse transcriptome and have identified numerous genes which are involved in osteoarthritis pathogenesis.

2021-01-01 | GSE153179 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data