Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Manistee National Forest ITS Fungal Sequences

PROVIDER: PRJNA680325 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13120597.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Project description:Indiana Forest Soil Fungal Sequences

| PRJNA679581 | ENA

Project description:Forest soil fungal raw sequences

| PRJNA900157 | ENA

Deshpande2019 - Random Forest model to predict long non-coding RNAs from coding RNAs in Zea Mays plant transcriptomic data

Project description:This is a Random Forest algorithm-based machine learning model to predict lncRNAs from coding mRNAs in plant transcriptomic data. The model assigns 1 for coding sequences and 2 for long non-coding sequences. The prediction is performed using a combination of Open Reading Frame (ORF) based, Sequence-based and Codon-bias features. Users need to download the curated ONNX model and also need to convert the sequences into feature matrix as mentioned in PLIT paper (Deshpande et al. 2019) to make predictions on sequences from Zea Mays sequence data.

2023-05-22 | BIOMD0000001067 | BioModels

Madidi_rawdata_and_metadata_20221018

Project description:This dataset represents woody plants recorded in 16 1-ha forest plots in an elevational gradient in Madidi National Park, Bolivia, ranging from lowland Amazonian moist forest and lowland dry forest to the treeline of the Andean Altiplano. This work was carried out by David Henderson and Jonathan Myers (Washington University in St. Louis), Sebastian Tello (Missouri Botanical Garden and University of Missouri, St. Louis), and Brian Sedio (University of Texas at Austin and Smithsonian Tropical Research Institute).

2022-10-18 | MSV000090549 | MassIVE

Project description:Fungal sequences

| PRJNA1032646 | ENA

Methylation studies in yellow-bellied marmots

Project description:An Infinium microarray platform (GPL28271, HorvathMammalMethylChip40) was used to generate DNA methylation data from blood samples from yellow-bellied marmots (Marmota flaviventris). DNA methylation data from n=159 blood samples. All samples were collected as part of a long-term study of a free-living population of yellow-bellied marmots in the Gunnison National Forest, Colorado (USA), where marmots were captured and blood samples collected biweekly during the their active season (May to August). Genomic DNA was extracted with Qiagen DNeasy blood and tissue kit.

2022-04-13 | GSE174544 | GEO

Project description:forest fungal community

| PRJNA1079527 | ENA

soil metagenome

Project description:Fungal Sequences Metagenome

| PRJNA184038 | ENA

Project description:Fungal illumina sequences

| PRJNA1021002 | ENA

soil metagenome

Project description:Bankhead National Forest 2012 Metagenome

| PRJNA178021 | ENA