Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Butterfly backcrosses

PROVIDER: PRJNA684967 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13249440_1.fastq.gz	Fastqsanger.gz
	SRR13249440_2.fastq.gz	Fastqsanger.gz
	SRR13249441_1.fastq.gz	Fastqsanger.gz
	SRR13249441_2.fastq.gz	Fastqsanger.gz
	SRR13249442_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 20

Similar Datasets

De novo transcriptome analysis profiles gene expression in Vanessa cardui wing patterns

Project description:Butterfly wing patterns are an important model for studying the genetic basis of morphological evolution. Here we used RNA-seq expression profiling in the butterfly Vanessa cardui to characterize the transcriptional basis of wing pigmentation. This approach identified numerous candidate genes including known and suspected components of the insect melanin and ommochrome biosynthetic pathways.

2017-05-04 | GSE78119 | GEO

Transcription profiling of Arabidopsis local and distal leaves in response to eggs of the Pieris rapae butterfly

Project description:Expression profiling of the effect of eggs of the Pieris rapae butterfly on Arabidopsis thaliana local leaf vs. distal leaf using 5mm leaf disk

2007-04-04 | E-CAGE-189 | biostudies-arrayexpress

Contrasting roles of transcription factors spineless and EcR in the highly dynamic chromatin landscape of butterfly wing metamorphosis

Project description:Background: We studied the chromatin accessibility landscsape in wings during butterfly metamorphosis, and investigate which transcription factors might be driving changes in accessibility Methods: We sequencing the Junonia coenia genome, and we studied chromatin accessibility using ATAC seq in multiple stages of wing development in both forewings and hindwings. For sites showing a large change in accessibility, we investigate which motifs are enriched, and correlate this with changes in gene expression of associated transcription factors. We confirm promising candidates with ChIP-seq Results: We find a highly dynamic landscape, with multiple peaks showing a double increase in accessibility throughout development. We show that transcription factor spineless, but not ecdysone receptor, is highly predictive of opening sites Conclusions: This work provides a characterization of the chromatin dynamics of insect wing metamorphosis, identifies novel candidate chromatin remodeling factors in insects, and provides the first genome assembly of the model butterfly Junonia coenia, with gene and cis-regulatory element annotations

2019-05-07 | GSE121542 | GEO

Contrasting roles of transcription factors spineless and EcR in the highly dynamic chromatin landscape of butterfly wing metamorphosis

2019-04-30 | GSE121541 | GEO

Transcription profiling of Arabidopsis local and distal leaves in response to eggs of the Pieris rapae butterfly using leaf disks the size of the egg batch

Project description:Expression profiling of the affect of eggs of the Pieris brassicae butterfly on Arabidopsis thaliana local leaf vs. the distal leaf using leaf disks the size of the egg batch.

2007-04-04 | E-CAGE-190 | biostudies-arrayexpress

The role of gene duplication in shaping divergent patterns of gene expression across a complex life cycle

Project description:The objective of this study was to explore the transcriptional basis of the holometabolous development of Danaus plexippus (the monarch butterfly), which we reasoned would lend insight into how complex life cycles evolve.

2024-01-21 | GSE253389 | GEO

Duplication and expression evolution of butterfly mouthparts genes associated with feeding

Project description:We sequenced the mRNA of three species of Heliconius butterfly and Eueides isabella in order to identify genes upregulated in the mouthparts tissues. Sequencing libraries were produced for three tissues types (mouthparts, legs and antennae), for one male and one female of each species.

2016-08-05 | E-MTAB-3446 | biostudies-arrayexpress

Project description:Monarch butterfly microbiomes

| PRJNA716088 | ENA

insect gut metagenome

Project description:Monarch butterfly microbiome

| PRJNA194573 | ENA

Papilionoidea

Project description:Butterfly genome assembly

| PRJNA606954 | ENA