Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacillus siamensis strain:B28 | isolate:Kimchi

ABSTRACT: Bacillus siamensis strain:B28 | isolate:Kimchi Genome sequencing

PROVIDER: PRJNA685583 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Functional Genomic Insights into Probiotic Bacillus siamensis Strain B28 from Traditional Korean Fermented Kimchi.

Project description:Bacillus siamensis strain B28 was previously isolated from traditional Korean fermented kimchi and inhibited expression of the microphthalmia-associated transcription factor and β-catenin in human embryonic kidney 293 cells. Here, we determined the complete genome sequence of strain B28 and compared it with other strains to elucidate its potential probiotic properties. Strain B28 does not contain antibiotic resistance-, hemolysin- or enterotoxin-encoding genes. The genome includes genes related to survival in extreme conditions, adhesion in the gut, and synthesis of the bacteriocin. Considering the potential for enhancement of human health, the strain B28 genome encodes genes related to production of eight essential amino acids, γ-aminobutyric acid, branched-chain fatty acids, γ-glutamyltransferase, and subtilisin. There are genes for the synthesis of uracil, lipoteichoic acid, glutathione, and several reactive oxygen species-scavenging enzymes. Experimentally, strain B28 exhibited sensitivity to eight antibiotics and antibacterial activity against seven foodborne pathogens. B. siamensis B28 is a safe strain with potential for development as a probiotic.

| S-EPMC8394110 | biostudies-literature

Bacillus siamensis strain:275 | isolate:275

Project description:Bacillus siamensis strain:275 | isolate:275 Genome sequencing

| PRJNA361420 | ENA

Bacillus siamensis strain:653 | isolate:02

Project description:Bacillus siamensis strain:653 | isolate:02 Genome sequencing

| PRJNA895894 | ENA

Bacillus siamensis strain:GUWM35 | isolate:SOIL

Project description:Bacillus siamensis strain:GUWM35 | isolate:SOIL Genome sequencing

| PRJNA792095 | ENA

Bacillus siamensis isolate:Populus euphratica

Project description:Bacillus siamensis isolate:Populus euphratica Genome sequencing

| PRJNA634623 | ENA

Bacillus siamensis

Project description:Bacillus siamensis overview

| PRJNA162269 | ENA

Limosilactobacillus fermentum strain:kimchi | isolate:kimchi

Project description:Limosilactobacillus fermentum strain:kimchi | isolate:kimchi Genome sequencing

| PRJNA1052953 | ENA

Weissella cibaria strain:kimchi | isolate:kimchi

Project description:Weissella cibaria strain:kimchi | isolate:kimchi Genome sequencing

| PRJNA1163981 | ENA

Weissella cibaria strain:kimchi | isolate:kimchi

Project description:Weissella cibaria strain:kimchi | isolate:kimchi Genome sequencing

| PRJNA436626 | ENA

Bacillus siamensis

Project description:Bacillus siamensis Genome sequencing

| PRJNA971130 | ENA

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data