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ABSTRACT: Distinct nirS- type denitrifier communities inhabit on south- and north-facing slopes in an alpine ecosystem

PROVIDER: PRJNA688613 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR13327314_1.fastq.gz	Fastqsanger.gz
	SRR13327314_2.fastq.gz	Fastqsanger.gz
	SRR13327315_1.fastq.gz	Fastqsanger.gz
	SRR13327315_2.fastq.gz	Fastqsanger.gz
	SRR13327316_1.fastq.gz	Fastqsanger.gz

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Project description:Distinct nosZ denitrifier communities inhabit on south- and north-facing slopes in an alpine ecosystem

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Project description:Distinct communities of ammonia-oxidizing bacteria inhabit on south- and north-facing slopes in an alpine ecosystem

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Project description:Distinct communities of ammonia-oxidizing archaea inhabit on south- and north-facing slopes in an alpine ecosystem

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Denitrifying bacterial assemblages respond to environmental conditions of a shallow estuary

Project description:Molecular analysis of dissimilatory nitrite reductase genes (nirS) was conducted using a customized microarray containing 165 nirS probes (archetypes) to identify members of sedimentary denitrifying communities. The goal of this study was to examine denitrifying community responses to changing environmental variables over spatial and temporal scales in the New River Estuary (NRE), NC, USA. Multivariate statistical analyses revealed three denitrifier assemblages and uncovered “generalist” and “specialist” archetypes based on the distribution of archetypes within these assemblages. Generalists, archetypes detected in all samples during at least one season, were commonly world-wide found in estuarine and marine ecosystems, comprised 11-29% of the abundant NRE archetypes. Archetypes found in a particular site, “specialists”, were found to co-vary based on site specific conditions. Archetypes specific to the lower estuary in winter were designated Cluster I and significantly correlated by sediment Chl a and porewater Fe2+. A combination of specialist and more widely distributed archetypes formed Clusters II and III, which separated based on salinity and porewater H2S, respectively. The co-occurrence of archetypes correlated with different environmental conditions highlights the importance of habitat type and niche differentiation among denitrifying communities and supports the essential role of individual community members in overall ecosystem function.

2017-05-02 | GSE98190 | GEO

Project description:The communnity of nirS-denitrifier

| PRJNA792035 | ENA

The microbial functional diversity in response to altered precipitation on Tibet Plateau as characterized by GeoChip

Project description:Global warming substantially changes precipitation patterns in the Tibetan plateau, with projection of increased precipitation in southern and northern Tibet but decreased precipitation in the center. Understanding mechanisms of such changes in greenhouse gas emissions is of vital importance in predicting ecosystem feedbacks to climate changes. Nonetheless, it has been hampered by limited knowledge in soil microbial communities, one of the major drivers of greenhouse gas emission. Here, we report a field experiment simulating drying and wetting conditions in the Tibetan grassland. Our field site is located at the Haibei Alpine Grassland Ecosystem Research Station in the northeast of Tibet Plateau, China, and we employed GeoChip 5.0 180K to analyze microbial responses.

2016-05-28 | GSE82006 | GEO

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