Project description:In general, the endosphere isolate EC18 showed more numbers of genes significantly altered in the presence of root exudates than the soil isolate SB8 . Some of the altered genes in the two strains showed overlap. Some of these genes were previously reported to be involved in microbe-plant interactions, such as organic substance metabolism, oxidation reduction, transmembrane transportation and a subset with putative or unknown function. It was also found some genes showed opposite trend among the two strains.

2017-04-26 | GSE98148 | GEO

Fulvimarina manganoxydans strain:CGMCC 1.10972 | isolate:CGMCC 1.10972

Project description:Fulvimarina manganoxydans CGMCC 1.10972 genome sequencing

| PRJNA370078 | ENA

Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to soil media

Project description:Summary: Salmonella enterica serovar Typhimurium strain 14028s transcriptome response to DS soil suspension (DS) and suspension of autoclaved DS soil (DA) compared to minimal medium (MM). Purpose: Salmonella mRNA profile, when grown in different media was compared to minimal medium to reveal environment specific transcriptional changes. Methods: mRNA profiles were generated using Illumina HiSeq in triplicates. The sequences were analysed using Bowtie2 followed by Cufflinks.

2020-03-31 | GSE132633 | GEO

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