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Prunus mira

ABSTRACT: Prunus mira Genome sequencing

PROVIDER: PRJNA691719 | ENA |

REPOSITORIES: ENA

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Dataset's files

Source:

			Action	DRS
	SRR13434475_1.fastq.gz	Fastqsanger.gz
	SRR13434475_2.fastq.gz	Fastqsanger.gz
	SRR13434476_1.fastq.gz	Fastqsanger.gz
	SRR13434476_2.fastq.gz	Fastqsanger.gz
	SRR13434477_1.fastq.gz	Fastqsanger.gz

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Project description:We have sequenced a wild Prunus mume and constructed a reference sequence for this genome. In order to improve quality of gene models, RNA samples of five tissues (bud, leaf, root, stem, fruit) were extracted from the Prunus mume. To investigate tissue specific expression using the reference genome assembly and annotated genes, we extracted RNA samples of different tissues and conducted transcriptome sequencing and DEG analysis. Five RNA pools were created corresponding to different tissues of the Prunus mume.

2012-12-27 | E-GEOD-40162 | biostudies-arrayexpress