Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Schrenkiella parvula cultivar:Lake Tuz

ABSTRACT: Schrenkiella parvula Lake Tuz Gene Expression Profiling - SpShootPooled transcriptome

PROVIDER: PRJNA696869 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Schrenkiella parvula cultivar:Lake Tuz

Project description:Schrenkiella parvula Lake Tuz Gene Expression Profiling - SpRootPooled transcriptome

| PRJNA696870 | ENA

RNA-seq of roots of Schrenkiella parvula seedlings treated with 0mM or 175mM NaCl for 0 h, 3 h, 24 h and 48 h.

Project description:The purpose of the experiments is to understand transcriptional reprogramming in roots of halophyte Schrenkiella parvula (S. parvula) that may contribute to its high salt tolerance. Root materials were harvested from S. parvula seedlings grown on agar plates with ½ strength Murashige-Skoog (½MS) medium including vitamins for 4 days and transferred to ½MS medium supplemented with 0mM or 175mM NaCl for 0h, 3h, 24h or 48h.

2023-02-18 | E-MTAB-12424 | biostudies-arrayexpress

Schrenkiella parvula, Arabidopsis thaliana

Project description:Comparison of responses to boron toxicity between Arabidopsis thaliana and Schrenkiella parvula

| PRJNA663969 | ENA

Schrenkiella parvula isolate:seedlings | cultivar:Wild type Thellungiella parvula (Schrenkiella parvula/Eutrema parvulum) (CS22663) from ABRC

Project description:Thellungiella parvula (Schrenkiella parvula/Eutrema parvulum), wild type, shoot and roots from seedlings at 8 day-old

| PRJNA877258 | ENA

Comparison of basal gene expression strengths between Schrenkiella parvula and Arabidopsis thaliana

Project description:Using RNA sequencing, we compared transcriptomes of root and aerial tissues of S. parvula and Arabidopsis and identified genes and pathways with significantly different basal expression strengths. Many stress-related ion transporter genes in S. parvula showed increased copy numbers and basal expression strengths compared with Arabidopsis, with evidence of subfunctionalization. These results provide a blueprint for mechanisms of plant ion stress tolerance as well as potential genetic resources for crop improvement in closely related species. Note: All samples in SRA were assigned the same sample accession (SRS845940 and SRS845941). This is incorrect as there are different samples, hence “Source Name” was replaced with new values. Comment[ENA_SAMPLE] contains the original SRA sample accessions.

2015-02-16 | E-MTAB-4369 | biostudies-arrayexpress

Contribution of Veillonella parvula to Pseudomonas aeruginosa mediated pathogenicity in a murine tumor model system

Project description:We investigated the specific interactions of the most dominant bacterial CF-pathogen, Pseudomonas aeruginosa, and the anaerobic bacterium Veilllonella parvula, that has been recovered at comparable cell numbers in the respiratory tract of CF patients. We used our recently established in-vivo murine tumor model to investigate mutual influences of the two pathogens during a biofilm-associated infection process. We found that although P. aeruginosa and V. parvula colonized distinct niches within the tumor, in mice that were co-infected with both bacterial species significant higher cell numbers of P. aeruginosa were recovered from the tumor tissue. Concordantly, in vivo transcriptional profiling implied that the presence of V. parvula supports P. aeruginosa growth at the infected host site, and the higher P. aeruginosa load correlated with clinical deterioration.

2014-11-06 | GSE58388 | GEO

Schrenkiella parvula

Project description:Eutrema parvulum overview

| PRJNA63843 | ENA

Copper ions inhibit Streptococcus mutans-Veillonella parvula dual biofilm by activating Streptococcus-mutans reactive nitrogen species

Project description:To investigate the inhibition mechanism of copper ions on S. mutans-V. parvula dual biofilm.

2023-02-01 | GSE222218 | GEO

Quercus parvula

Project description:Quercus parvula Transcriptome or Gene expression

| PRJNA1013269 | ENA

Contribution of Veillonella parvula to Pseudomonas aeruginosa mediated pathogenicity in a murine tumor model system

2014-11-06 | E-GEOD-58388 | biostudies-arrayexpress