Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Slaughterhouse waste digestion (Archaea)

PROVIDER: PRJNA697826 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13576639.fastq.gz	Fastqsanger.gz
	SRR13576640.fastq.gz	Fastqsanger.gz
	SRR13576641.fastq.gz	Fastqsanger.gz
	SRR13576642.fastq.gz	Fastqsanger.gz
	SRR13576643.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 5

Similar Datasets

Project description:Slaughterhouse waste digestion (Bacteria)

| PRJNA697825 | ENA

Project description:Enhancement of archaea during anaerobic digestion of high loadings of Slaughterhouse waste

| PRJNA871971 | ENA

Project description:Anaerobic digestion of slaughterhouse waste (pork liver and fat)

| PRJNA857198 | ENA

Project description:Enhancement of bacteria during digestion of high loading of Slaughterhouse waste

| PRJNA871969 | ENA

The microbial functional gene diversity in anaerobic digesters under different organic loadings

Project description:Anaerobic digestion is a popular and effective microbial process for waste treatment. The performance of anaerobic digestion processes is contingent on the balance of the microbial food web in utilizing various substrates. Recently, co-digestion, i.e., supplementing the primary substrate with an organic-rich co-substrate has been exploited to improve waste treatment efficiency. Yet the potential effects of elevated organic loading on microbial functional gene community remains elusive. In this study, functional gene array (GeoChip 5.0) was used to assess the response of microbial community to the addition of poultry waste in anaerobic digesters treating dairy manure. Consistent with 16S rRNA gene sequences data, GeoChip data showed that microbial community compositions were significantly shifted in favor of copiotrophic populations by co-digestion, as taxa with higher rRNA gene copy number such as Bacilli were enriched. The acetoclastic methanogen Methanosarcina was also enriched, while Methanosaeta was unaltered but more abundant than Methanosarcina throughout the study period. The microbial functional diversity involved in anaerobic digestion were also increased under co-digestion.

2017-01-12 | GSE93419 | GEO

Project description:archaea in anaerobic digestion of sewage sludge and organic waste

| PRJNA1001136 | ENA

The DNA-binding protein HTa from Thermoplasma acidophilum is an archaeal histone analog (Mnase-seq and EMSA-seq)

Project description:Histones are a principal constituent of chromatin in eukaryotes and fundamental to our understanding of eukaryotic gene regulation. In archaea, histones are phylogenetically widespread but not universal: several archaeal lineages have independently lost histone genes. What prompted or facilitated these losses and how archaea without histones organize their chromatin remains largely unknown. Here, we use micrococcal nuclease digestion of native and reconstituted chromatin to elucidate primary chromatin architecture in an archaeon without histones, the acido-thermophilic archaeon Thermoplasma acidophilum. We confirm and extend prior results showing that T. acidophilum harbours a HU family protein, HTa, that protects part of the genome from MNase digestion. Charting HTa-based chromatin architecture in vitro, in vivo and in an HTa-expressing E. coli strain, we present evidence that HTa is an archaeal histone analog. HTa-protected fragments are GC-rich, display histone-like mono- and dinucleotide patterns around a conspicuous dyad, exhibit relatively invariant positioning throughout the growth cycle, and show archaeal histone-like oligomerization behaviour. Our results suggest that HTa, a DNA-binding protein of bacterial origin, has converged onto an architectural role filled by histones in other archaea.

2019-10-08 | GSE138576 | GEO

Project description:anaerobic digestion sludge (archaea)

| PRJNA1041344 | ENA

Project description:Food waste anaerobic digestion

| PRJNA725154 | ENA

Project description:Anaerobic digestion of food waste and paper waste

| PRJNA1095245 | ENA