Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Genome skimming of Hibiscus tiliaceus

PROVIDER: PRJNA698892 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13610058.fastq.gz	Fastqsanger.gz

Items per page:

1 - 1 of 1

Similar Datasets

Project description:chloroplast genome of Hibiscus tiliaceus

| PRJNA666500 | ENA

Talipariti

Project description:Phylogenomics of sea hibiscus (Hibiscus tiliaceus) group

| PRJDB14856 | ENA

Actinomycetes strain:HNM1077 | isolate:hibiscus tiliaceus

Project description:Actinomycetes strain:HNM1077 | isolate:hibiscus tiliaceus Genome sequencing

| PRJNA1170934 | ENA

Project description:Hibiscus tiliaceus phytobiomes along a precipitation gradient

| PRJNA543421 | ENA

Small RNA transcriptome of Hibiscus syriacus provides insights into the potential influence of microRNAs in flower development and terpene synthesis

Project description:MicroRNAs (miRNAs) are essential small RNA molecules that regulate the expression of target mRNAs in plants and animals. Here, we aimed to identify miRNAs and their putative targets in Hibiscus syriacus, the national flower of South Korea. Therefore, we employed high-throughput sequencing of small RNAs obtained from four different tissues (i.e., leaf, root, flower, and ovary) and identified 33 conserved and 30 novel miRNA families, many of which showed differential tissue-specific expressions. In addition, we computationally predicted novel targets of miRNAs and validated some of them using 5′ rapid amplification of cDNA ends analysis. One of the validated novel targets of miR477 was a terpene synthase, the primary gene involved in the formation of disease-resistant terpene metabolites such as sterols and phytoalexins. In addition, a predicted target of conserved miRNAs, miR396, is SHORT VEGETATIVE PHASE, which is involved in flower initiation and is duplicated in Hibiscus syriacus. Collectively, this study provides the first reliable draft of the Hibiscus syriacus miRNA transcriptome that should constitute a basis for understanding the biological roles of miRNAs in Hibiscus syriacus.

2017-09-08 | GSE99329 | GEO

Transcription profiling of Arabidopsis protoplasts transfected with TCV or HCRSV and their coat protein mutants

Project description:Common transcriptional responses of Arabidopsis thaliana protoplasts transfected with turnip crinkle virus (TCV) , hibiscus chlorotic ringspot virus (HCRSV) and their coat protein mutants.

2009-07-07 | E-MEXP-1218 | biostudies-arrayexpress

Hibiscus

Project description:Hibiscus dasycalyx, Hibiscus laevis, Hibiscus moscheutos, and Hibiscus trionum Genome sequencing

| PRJNA678364 | ENA

Project description:Genome Skimming

| PRJNA755496 | ENA

Project description:Genome skimming

| PRJNA777116 | ENA

Project description:Hibiscus sabdariffa genome sequencing

| PRJNA995745 | ENA