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Identification of JMJD1C target genes in LN-229 glioblastoma cells.

ABSTRACT: Identification of JMJD1C target genes in LN-229 glioblastoma cells.

PROVIDER: PRJNA700586 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR13651635_1.fastq.gz	Fastqsanger.gz
	SRR13651635_2.fastq.gz	Fastqsanger.gz
	SRR13651636_1.fastq.gz	Fastqsanger.gz
	SRR13651636_2.fastq.gz	Fastqsanger.gz
	SRR13651637_1.fastq.gz	Fastqsanger.gz

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Identification of JMJD1C target genes in LN-229 glioblastoma cells.

Project description:JMJD1C shows ubiquitous expression and is often downregulated in tumor entities compared to healthy tissues.JMJD1C inhibit growth of the glioblastoma cell line LN-229. Here, JMJD1C knockdown leads to malignant progression in the glioblastoma cell line LN-229.

2021-02-09 | GSE166351 | GEO

Effect of Vortioxetine treatment on gene expression of LN-229 glioblastoma cells over time

Project description:The atypical antidepressant Vortioxetine represents the most effective neuroactive drug with anti-glioblastoma efficacy across glioblastoma patient samples and model systems. To closer examine the temporal dynamics of Vortioxetine, we performed in-depth transcriptomic profiling of LN-229 cells following Vortioxetine treatment. We performed gene expression profiling analysis using data obtained from RNA-seq across 6 different time points during the 24 hours following Vortioxetine treatment.

2024-07-29 | GSE214968 | GEO

RNA sequencing analysis of LN-229-shControl and LN-229-shMOB2 cells

Project description:RNA sequencing analysis of LN-229-shControl and LN-229-shMOB2 cells

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Expression data from WIF1 induced LN-229 (GBM cell line)

Project description:Glioblastoma is the most aggressive primary brain tumor in adults and due to the invasive nature it cannot be completely removed. We have recently shown that the WNT inhibitory factor 1 (WIF1), a secreted inhibitor of WNTs, is downregulated in glioblastoma and acts as strong tumor suppressor. In search of a mediator for this function differential gene expression profiles of WIF1-expressing cells were performed. MALAT1, a long non-coding RNA and key positive regulator of invasion, emerged as the top downregulated gene. Indeed, knock-down of MALAT1 reduced migration in glioblastoma cells, without effect on proliferation. LN-229 cells induced with Doxocyclin to express WIF1 were compared to the non-induced control (two biological replicates each)

2015-02-23 | E-GEOD-58525 | biostudies-arrayexpress

Effect of IDH1 mutation induced by doxycycline on gene expression during VSVΔ51 infection in LN-229-TRE-R132H glioblastoma cells

Project description:To investigate whether IDH1 mutation influence the effects of oncolytic virus VSVΔ51, we transduced doxycycline-inducible IDH1-R132H lentiviruses into LN-229 to establish the LN-229-TRE-R132H cell line. We then performed gene expression profiling analysis using data obtained from RNA-seq of LN-229-TRE-R132H cells infected with or without VSVΔ51 in the presence or absence of IDH1 mutation induced by doxycycline.

2023-09-19 | GSE208634 | GEO

Digital RNA with pertUrbation of Genes (DRUG-Seq) of LN-229 glioblastoma cells treated with 20 different drugs at two time points

Project description:DRUG-Seq is a miniatruized and multiplexed RNA-Seq protocol described in Ye et al., 2018 (https://www.nature.com/articles/s41467-018-06500-x) To determine transcriptional changes upon drug perturbation in LN-229 glioblastoma cells, we profiled 20 drug responses across two time-points (6 and 22 hours) by DRUG-Seq

2024-07-29 | GSE214965 | GEO

Comparative proteomic analysis of EV-derived from glioblastoma (LN 229 cell line) and healthy human astrocytes, neurons and endothelial brain cells

Project description:This study aims to identify EV-derived glioblastoma biomarkers through a comparative mass spectrometry-based bottom-up proteomic analysis of glioblastoma LN-229 cell line and healthy human neurons, astrocytes, and endothelial brain cells (HEBC). The work investigates cancer cells' communication with the healthy brain environment

2024-09-03 | PXD055487 |

Effect of Vortioxetine treatment on gene expression of LN-229 glioblastoma cells over time

Project description:Effect of Vortioxetine treatment on gene expression of LN-229 glioblastoma cells over time

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Jmjd1c

Project description:Jmjd1c

| PRJNA304620 | ENA

Effect of IDH1 mutation induced by doxycycline on gene expression during VSVΔ51 infection in LN-229-TRE-R132H glioblastoma cells

Project description:Effect of IDH1 mutation induced by doxycycline on gene expression during VSVΔ51 infection in LN-229-TRE-R132H glioblastoma cells

| PRJNA860394 | ENA

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