Project description:Arthrobacter chlorophenolicus A6 is a 4-chlorophenol degrading soil bacterium with high phyllosphere colonization capacity. Till now the genetic basis for the phyllosphere competency of Arthrobacter or other pollutant-degrading bacteria is uncertain. We investigated global gene expression profile of A. chlorophenolicus grown in the phyllosphere of common bean (Phaseolus vulgaris) compared to growth on agar surfaces. We designed transcriptome arrays and investigated which genes had different transcript levels in the phyllosphere of common bean (Phaseolus vulgaris) as compared to agar surfaces. Since water availability is considered an important factor in phyllosphere survival and activity, we included both high and low relative humidity treatments for the phyllosphere-grown cells. In addition, we determined the expression profile under pollutant exposure by the inclusion of two agar surface treatments, i.e. with and without 4-chlorophenol.

2013-06-21 | E-GEOD-48198 | biostudies-arrayexpress

Pyrus hondoensis cultivar:Yu

Project description:Pyrus hondoensis cultivar:Yu Transcriptome or Gene expression

| PRJNA280932 | ENA

Morus alba cultivar:Yu-711

Project description:Morus alba cultivar:Yu-711 Raw sequence reads

| PRJNA771759 | ENA

Morus alba cultivar:Yu-711

Project description:Morus alba cultivar:Yu-711 Raw sequence reads

| PRJNA1019345 | ENA

Morus alba cultivar:Yu-711

Project description:Morus alba cultivar:Yu-711 Raw sequence reads