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Microbiota decussata

ABSTRACT: Microbiota decussata overview

PROVIDER: PRJNA706088 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR13063600_1.fastq.gz	Fastqsanger.gz
	SRR13063600_2.fastq.gz	Fastqsanger.gz
	SRR13063700_1.fastq.gz	Fastqsanger.gz
	SRR13063700_2.fastq.gz	Fastqsanger.gz
	SRR13063800_1.fastq.gz	Fastqsanger.gz

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HuMiChip analysis of Saliva microbiota

Project description:Human saliva microbiota is phylogenetically divergent among host individuals yet their roles in health and disease are poorly appreciated. We employed a microbial functional gene microarray, HuMiChip 1.0, to reconstruct the global functional profiles of human saliva microbiota from ten healthy and ten caries-active adults. Saliva microbiota in the pilot population featured a vast diversity of functional genes. No significant distinction in gene number or diversity indices was observed between healthy and caries-active microbiota. However, co-presence network analysis of functional genes revealed that caries-active microbiota was more divergent in non-core genes than healthy microbiota, despite both groups exhibited a similar degree of conservation at their respective core genes. Furthermore, functional gene structure of saliva microbiota could potentially distinguish caries-active patients from healthy hosts. Microbial functions such as Diaminopimelate epimerase, Prephenate dehydrogenase, Pyruvate-formate lyase and N-acetylmuramoyl-L-alanine amidase were significantly linked to caries. Therefore, saliva microbiota carried disease-associated functional signatures, which could be potentially exploited for caries diagnosis. The DMFT INDEX (Decayed, Missing, Filled [DMF] teeth index used in dental epidemiology) values are provided for each sample We employed a microbial functional gene microarray, HuMiChip 1.0, to reconstruct the global functional profiles of human saliva microbiota from ten healthy and ten caries-active adults.

2013-08-15 | E-GEOD-49875 | biostudies-arrayexpress

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