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Avicennia marina, Rhizophora apiculata, and Sonneratia alba

ABSTRACT: Gene body methylation confers transcription robustness in mangroves during long-term stress adaptation

PROVIDER: PRJNA706926 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR13876900_1.fastq.gz	Fastqsanger.gz
	SRR13876900_2.fastq.gz	Fastqsanger.gz
	SRR13876901_1.fastq.gz	Fastqsanger.gz
	SRR13876901_2.fastq.gz	Fastqsanger.gz
	SRR13876902_1.fastq.gz	Fastqsanger.gz

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Hypoglycemic and hepatoprotective effect of Rhizophora mucronata and Avicennia marina against streptozotocin-induced diabetes in male rats.

Project description:Objectives:Aqueous extracts of Rhizophora mucronata and Avicennia marina leaves were investigated for their hepatoprotective potential in diabetic rats. Materials and methods:One hundred twenty male albino rats were randomly assigned to eight equal groups (n = 15). The first group (control) comprised normal healthy rats, while the second to fifth groups were intraperitoneally injected with a single dose of streptozotocin (STZ) [60 mg/kg body weight (BW)] for induction of diabetes. Group 2 was kept as positive diabetic control, while groups 3-5 were orally treated with aqueous extracts of R. mucronata (400 mg/kg BW), A. marina (400 mg/kg BW) and with a combination of ½ a dose of the two plants, respectively, for six weeks. Groups 6-8 were non-diabetic rats that orally received aqueous extracts of R. mucronata (400 mg/kg BW), A. marina (400 mg/kg BW), and a combination of ½ a dose of the two plants, respectively, for 6 weeks. Results:STZ-induced diabetic rats showed a significant reduction in serum glucose and liver enzymes, increased serum insulin, Homeostasis Model Assessment of ?-cells (HOMA-?), and Homeostasis Model Assessment of Insulin Resistance (HOMA-IR). Histopathological and immunohistochemical examinations of the liver revealed improved pathologic criteria in the plant extract treated diabetic rats compared with the remarkable changes which had been seen in STZ-induced diabetic rats. Conclusion:This study suggests that the aqueous extract of R. mucronata or its combination with A. marina showed potent hypoglycemic and hepatoprotective effects for liver dysfunction, as well as histopathological and immunohistochemical changes in the liver of STZ-induced diabetic rats.

| S-EPMC7096112 | biostudies-literature

Rhizophora apiculata

Project description:Rhizophora apiculata overview

| PRJNA598492 | ENA

Rhizophora apiculata

Project description:Rhizophora apiculata Raw sequence reads

| PRJNA477761 | ENA

Rhizophora apiculata

Project description:transcriptomics of the chilling stress response in Rhizophora apiculata

| PRJNA880605 | ENA

Rhizophora apiculata

Project description:Constant conflict between Gypsy LTR retrotransposons and CHH methylation within a stress-adapted mangrove genome

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Characterization of the complete chloroplast genome of mangrove <i>Rhizophora apiculata</i> Blume (Rhizophoraceae).

Project description:The chloroplast (cp) genome sequence of Rhizophora apiculata was characterized. The cp genome length was 164,343 bp in length, containing a typical structure of a large single copy (LSC) of 93,155 bp, a small single copy (SSC) of 19,376 bp, and two inverted repeats (IRs) of 25,906 bp, with a GC content of 34.9%. There were 131 genes were annotated in the cp genome, including 85 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. A phylogenetic analysis using cp genomes of mangroves and ecologically associated species resolved R. apiculata in Rhizophora with R. stylosa and R. x lamarckii. This complete chloroplast sequence offers a promising tool for further species identification and evolutionary studies of Rhizophora, as well as for mangroves.

| S-EPMC8231346 | biostudies-literature

Rhizophora apiculata isolate:Ranong

Project description:Rhizophora apiculata isolate:Ranong Genome sequencing and assembly

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Rhizophora apiculata Genome sequencing

Project description:Rhizophora apiculata Genome sequencing

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Antitumor Triterpenoid Saponin from the Fruits of Avicennia marina.

Project description:The fruits of Avicennia marina are widely used for both medicine and food in Guangxi of China. As a part of our continuous effort to search for bioactive molecules from the plant, the fruits of A. marina were investigated, which has led to one new triterpenoid saponin (1) and 29 known compounds been isolated and their structures were established by using spectroscopic methods and comparing with literature data. The new triterpenoid saponin showed cytotoxicity against GSC-3# and GSC-18# with the IC50 values were 12.21 and 5.53 μg/mL respectively, and most of the known compounds had significant antioxidant capacity with the IC50 values ranging from 0.36 to 13.07 μg/mL.

| S-EPMC6109444 | biostudies-literature

Phenology and Growth dynamics of Avicennia marina in the Central Red Sea.

Project description:The formation of nodes, stem elongation and the phenology of stunted Avicennia marina was examined in the Central Red Sea, where Avicennia marina is at the limit of its distribution range and submitted to extremely arid conditions with salinity above 38 psu and water temperature as high as 35°?C. The annual node production was rather uniform among locations averaging 9.59 node y(-1), which resulted in a plastocron interval, the interval in between production of two consecutive nodes along a stem, of 38 days. However, the internodal length varied significantly between locations, resulting in growth differences possibly reflecting the environmental conditions of locations. The reproductive cycle lasted for approximately 12 months, and was characterized by peak flowering and propagule development in November and January. These phenological observations provide a starting point for research and restoration programs on the ecology of mangroves in the Central Red Sea, while the plastochrone index reported here would allow calculations of the growth and production of the species from simple morphological measurements.

| S-EPMC5125269 | biostudies-other

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