Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Reassessing endothelial-to-mesenchymal transition in postnatal mouse bone marrow using single-cell RNA sequencing

ABSTRACT: Reassessing endothelial-to-mesenchymal transition in postnatal mouse bone marrow using single-cell RNA sequencing

PROVIDER: PRJNA706949 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Similar Datasets

Reassessing endothelial-to-mesenchymal transition in postnatal mouse bone marrow using single-cell RNA sequencing

Project description:Conflicting reports exist on whether endothelial cells (ECs) serve as a source of bone marrow stromal cells (BMSCs). In studies concerning the endothelial-to-mesenchymal transition (EndoMT), ECs expressing mesenchymal markers, as well as BMSCs expressing endothelial markers, are typically considered intermediates of EndoMT. To understand the lineage relationship between ECs and BMSCs in postnatal mouse bone marrow, we performed single-cell RNA sequencing (scRNA-seq) on ECs and BMSCs obtained from 5-week-old wild-type C57BL/6J mice, and analyzed the potential intermediates of EndoMT. Subsequently, BMSC and EC lineage tracing models, flow cytometry, and immunostaining techniques were used to validate the findings from scRNA-seq analysis.

2023-11-24 | GSE168333 | GEO

Detect IGF1R function in postnatal bone marrow mesenchymal stem cell

Project description:Detect IGF1R function in postnatal bone marrow mesenchymal stem cell

| PRJNA1157324 | ENA

Endothelial-to-osteoblast transition in normal mouse bone development and postnatal growth

Project description:Endothelial-to-osteoblast transition in normal mouse bone development and postnatal growth

| PRJNA857313 | ENA

Analysis of Gene Expression changes in human intestinal endothelial-to-mesenchymal transition

Project description:This SuperSeries is composed of the following subset Series: GSE15933: Analysis of Gene Expression changes in human intestinal endothelial-to-mesenchymal transition - UNTREATED/CONTROL GROUP GSE15934: Analysis of Gene Expression changes in human intestinal endothelial-to-mesenchymal transition - TRANSFORMED GROUP Refer to individual Series

2011-11-02 | E-GEOD-15975 | biostudies-arrayexpress

RNAseq of human bone marrow mesenchymal stem cells in co-culture with endothelial cells

Project description:Human bone marrow mesenchymal stem cells (MSCs) were co-cultured for 7 days with endothelial cells, where they participated in the formation of microcapillaries. MSCs that were exposed to the microcapillaries or kept as monocultures were isolated by FACS and analyzed by RNAseq.

2018-07-01 | E-MTAB-6849 | biostudies-arrayexpress

Acetate controls endothelial-to-mesenchymal transition during atherosclerosis

Project description:Acetate controls endothelial-to-mesenchymal transition during atherosclerosis

| PRJNA933152 | ENA

RNAseq analysis of bone marrow mesenchymal stem cells

Project description:RNAseq analysis of bone marrow mesenchymal stem cells

| PRJNA668633 | ENA

Gene expression in bone marrow mesenchymal lineage cell and endothelial cell populations of Cxcr4WHIM/+ mice [BM]

Project description:This study provides gene expression profiles of bone marrow mesenchymal lineage cell and endothelial cell subsets from a CXCR4 gain-of- function mouse model of WHIM syndrome at the population level.

2021-12-04 | GSE189936 | GEO

Inferferon gamma induced compositional changes in human bone marrow derived mesenchymal stem/stromal cells

Project description:2D IDA protein quantitation of mesenchymal stem cells derived from bone marrow across five donors. A total of 10 2D LC-MS runs were performed, using cells both not stimulated and following a 20 hour treatment with interferon gamma.

2017-04-05 | MSV000080890 | MassIVE

Acetate controls endothelial-to-mesenchymal transition during atherosclerosis [2]

Project description:To investigate the gene expression profiling during endothelial-to-mesenchymal transition , and identify the main changes in metaboltic and EndoMT related genes.

2023-05-01 | GSE224939 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data