Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Comprehensive metabolic and taxonomic reconstruction of an ancient microbial mat from the McMurdo Ice Shelf (Antarctica) by integrating genetic, metaproteomic and lipid biomarker analyses

PROVIDER: PRJNA707427 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13893275_1.fastq.gz	Fastqsanger.gz
	SRR13893275_2.fastq.gz	Fastqsanger.gz
	SRR13893276_1.fastq.gz	Fastqsanger.gz
	SRR13893276_2.fastq.gz	Fastqsanger.gz
	SRR13893277_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

seawater metagenome

Project description:McMurdo Ice Shelf water cavity targeted loci environmental

| PRJNA278982 | ENA

Microbial mat

Project description:Lipid biomarkers from microbial mats on the McMurdo Ice Shelf, Antarctica: signatures for life in the cryosphere

| PRJNA758785 | ENA

Metaproteomic analysis of King Ghezo's tomb wall

Project description:Metaproteomic analysis of King Ghezo's tomb wall in Abomey (Benin), capital of the ancient kingdom of Dahomey. Without any a priori metaproteomics interpretation allowed identification of the proteins and their taxonomical origins, and thus archaeological reconstruction of voodoo rituals of consecration and maintenance of vitality.

2024-11-06 | PXD040121 | Pride

McMurdo Ice Edge Time Series 2014-2015

Project description:McMurdo Ice Edge Time Series 2014-2015 Metagenome

| PRJNA704702 | ENA

Metaproteomic analysis of mouse gut microbiota in the early life: taxonomic, functional and quantitative analysis to evaluate breastfeeding modulation

Project description:Metaproteomic analysis of mouse gut microbiota in the early life: taxonomic, functional and quantitative analysis to evaluate breastfeeding modulation

2018-07-22 | MSV000082651 | MassIVE

Prolagus sardus

Project description:Mitochondrial genome reconstruction from ancient sample

| PRJEB57248 | ENA

Ross Sea Surface Water Metaproteomics

Project description:We sampled the microbial community at the sea ice edge in McMurdo Sound, Ross Sea at the same location (-77.62S, 165.41E) for four weeks (as described in Wu et al 2019, Nat. Comms.). We had four sampling dates corresponding to weeks 1 to 4: December 28 2014, January 6, 15, and 22 2015. Large volumes of water (150--250 L) were filtered from 1 m depth at the sea ice edge, and passed through three filters sequentially (3.0, 0.8, and 0.1 um, each 293 mm Supor filters). Filters with collected biomass were then placed in tubes with a sucrose-based preservative buffer (20 mM EDTA, 400 mM NaCl, 0.75 M sucrose, 50 mM Tris-HCl, pH 8.0) and stored at -80 C until sample processing. We extracted proteins after buffer exchange into a 3\% SDS solution as previously described Wu et al 2019, Nat. Comms.

2021-09-07 | PXD022995 | Pride

Project description:Sea ice dynamics drive benthic microbial communities in McMurdo Sound, Antarctica

| PRJNA721518 | ENA

RIS metagenome

Project description:Metagenomic analysis of microbial communities beneath the Ross Ice Shelf

| PRJEB35712 | ENA

Project description:Reconstruction of ancient microbial genomes from the human gut

| PRJNA561510 | ENA