Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Acid sprayed and non-sprayed vacuum packed beef at chiller storage

ABSTRACT: Raw sequence reads of acid sprayed and non-sprayed vacuum packed beef at chiller storage

PROVIDER: PRJNA713837 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR13949100_1.fastq.gz	Fastqsanger.gz
	SRR13949100_2.fastq.gz	Fastqsanger.gz
	SRR13949200_1.fastq.gz	Fastqsanger.gz
	SRR13949200_2.fastq.gz	Fastqsanger.gz
	SRR13949101_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 276

Similar Datasets

Structural changes and evolution of peptides during chill storage of pork

Project description:In this work, we investigated changes in protein structures in vacuum-packed pork during chill storage and its impact on in vitro protein digestion. Longissimus dorsi muscles were vacuum packed and stored at 4°C for 3 days. Samples were subjected to Raman spectroscopy, in vitro digestion and Nano LC-LTQ-Orbitrap XL MS/MS. The 3 d samples had lower α-helix content, but higher β-sheet, β-turn and random coil contents than the 0 d samples (P < 0.05). SDS-PAGE revealed significant protein degradation in the 3 d samples and the differences in digested products across storage time. Proteome analysis indicated that the 3 d samples had the higher susceptibility to digestion. Increasing protein digestibility was mainly attributed to the degradation of myofibrillar proteins. Thus, exposure of more enzymatic sites in loose protein structure during chill storage could increase protein degradation in meat.

2021-09-08 | PXD020595 | Pride

Vacuum packaged beef and lamb

Project description:Vacuum packaged beef and lamb Targeted loci

| PRJNA580325 | ENA

Gene expression in adipose, liver and skeletal muscle of mice fed a diet with c9, t11 conjugated linoleic acid enriched beef

Project description:Conjugated Linoleic Acid (CLA) is a collective term for the positional and geometric isomers of linoleic acid. In recent years CLA has been reported to have anti-carcinogenic, anti-obesity, anti-inflammatory and anti-artherogenic effects. The aim of this study was to determine the effects of a natural high-CLA enriched beef source on three primary insulin responsive tissues: adipose, liver and skeletal muscle. ob/ob mice were assigned to one of two diets: a control beef diet, low in c9, t11-CLA (control diet) or a c9, t11-CLA enriched beef diet. After a 28 day feeding trial, RNA was extracted from adipose, liver and skeletal muscle tissue and hybridized to Affymetrix microarrays.

2010-10-19 | E-GEOD-23337 | biostudies-arrayexpress

Draft genome of Lactobacillus algidus CMTALT10

Project description:Draft genome of Lactobacillus algidus CMTALT10 isolated from vacuum-packed beef carpaccio.

| PRJEB21909 | ENA

Draft genome of Lactobacillus fuchuensis MFPC41A2801

Project description:Draft genome of Lactobacillus fuchuensis MFPC41A2801 isolated from vacuum-packed beef carpaccio

| PRJEB21913 | ENA

Draft genome of Lactococcus piscium CMTALT17

Project description:Draft genome of Lactococcus piscium CMTALT17 isolated from vacuum-packed beef carpaccio

| PRJEB21911 | ENA

Draft genome of Lactococcus piscium CMTALT02

Project description:Draft genome of Lactococcus piscium CMTALT02 isolated from vacuum-packed beef carpaccio

| PRJEB21910 | ENA

Draft genome sequence of Leuconostoc carnosum MFPC16A2803

Project description:Draft genome sequence of Leuconostoc carnosum MFPC16A2803 isolated from vacuum-packed beef carpaccio

| PRJEB25280 | ENA

Food metagenome

Project description:THE SPOILAGE MICROBIOTA IN BRAZILIAN VACUUM-PACKED BEEF USING METAGENOMIC AND METABOLOMIC APPROACH

| PRJNA990334 | ENA

Identifying gene expression differences induced by diets that lead to higher omega-3 fatty acid deposition in beef cows

Project description:The objective of this project is identifying differentially expressed (DE) genes which are associated with higher omega-3 fatty acids deposition in beef cows. Omega-3 fatty acids have been found to influence meat flavor and are beneficial to human health. Supplementation of livestock diets with flaxseed, a rich source of ë±-linolenic acid, is the most common means of producing omega-3 fatty acid-enriched animal products. Towards the goal of enhancing beef fatty acid composition, 64 crossbred cull cows (~30 months of age) with similar breed composition were randomized by weight/body condition, and fed one of four 50:50 forage:concentrate diets on a DM basis (16 cows/treatment), containing ground barley grain with either hay or silage, supplemented with 0 or 15% ground flaxseed (DM basis). Cows were slaughtered after spending 140 days on the treatment diets. Five cows from each of the four diets were selected for transcriptional analysis based on FA profiles of the kidney fat collected at slaughter. RNA was isolated from Longissimus thoracis muscle, subcutaneous and kidney fat of each cow (20 samples/tissue) and hybridized in duplicate to BOMC 24K 60-mer microarrays. Differential gene expression between flax-fed and non-flax-fed cows as well as identifying those genes associated with fatty acid metabolism were studied.

2015-02-26 | E-MTAB-3371 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data