Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Candidatus Arthromitus sp. SFB-mouse-NYU

ABSTRACT: The genome of Th17 cell-inducing segmented filamentous bacteria reveals extensive auxotrophy and adaptations to the intestinal environment

PROVIDER: PRJNA71495 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other
	AGAG01.dat.gz	Other
	AGAG01.fasta.gz	Fasta.gz
	AGAG01.master.dat	Other

Items per page:

1 - 4 of 4

Similar Datasets

Candidatus Arthromitus sp. SFB-co

Project description:Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-co.

| PRJNA69911 | ENA

Candidatus Arthromitus sp. SFB-1

Project description:Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-1.

| PRJNA68497 | ENA

Candidatus Arthromitus sp. SFB-5

Project description:Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-5.

| PRJNA69909 | ENA

Candidatus Arthromitus sp. SFB-2

Project description:Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-2.

| PRJNA68847 | ENA

Candidatus Arthromitus sp. SFB-3

Project description:Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-3.

| PRJNA69901 | ENA

Candidatus Arthromitus sp. SFB-4

Project description:Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-4.

| PRJNA69905 | ENA

Candidatus Arthromitus sp. SFB-mouse

Project description:Draft Genome Sequence of Segmented Filamentous Bacteria Isolated from the Ileum of a Belgian Broiler Chicken.

| PRJNA1107022 | ENA

Candidatus Arthromitus sp. SFB-mouse-SU

Project description:Symbiotic lifestyle of segmented filamentous bacteria (SFB) revealed by single-cell genomics: SFB-mouse-SU.

| PRJNA76365 | ENA

SFB-driven epigenetic regulation in small intestinal epithelial cells

Project description:H3K27Ac enrichment in intestinal epithelial cells from intestine of germ-free and segmented filamentous bacteria (SFB)-monoassociated mice. Intestinal epithelial cells were harvested from the terminal ileum of germ-free or SFB mice. Chromatin immunoprecipitation was performed with anti-H3K27Ac. Sequencing was performed using the Illumina HiSeq2500. Reads were mapped to the mm10 genome using Bowtie.

2022-11-08 | GSE182628 | GEO

SFB-driven regulation in small intestinal epithelial cells during infection

Project description:Expression in intestinal epithelial cells from intestine of germ-free and segmented filamentous bacteria (SFB)-monoassociated mice during infection. Intestinal epithelial cells were harvested from the terminal ileum of germ-free or SFB mice infected with Citrobacter rodentium for 6 days. RNA was isolated using RNeasy Kit (Qiagen). Sequencing was performed using the Illumina HiSeq2500. Reads were mapped to the mm10 genome using Bowtie.

2022-11-08 | GSE182630 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data