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Paenibacillus riograndensis

ABSTRACT: Paenibacillus riograndensis overview

PROVIDER: PRJNA71695 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
	SRR12207914_1.fastq.gz	Fastqsanger.gz
	SRR12207914_2.fastq.gz	Fastqsanger.gz
	SRR12207915_1.fastq.gz	Fastqsanger.gz
	SRR12207915_2.fastq.gz	Fastqsanger.gz

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Transcriptome analysis reveals that sporulation is used as an iron deficiency resistance mechanism in Paenibacillus riograndensis SBR5

Project description:Transcriptome analysis of Paenibacillus riograndensis SBR5.

2015-04-11 | GSE66816 | GEO

Transcriptome analysis reveals that sporulation is used as an iron deficiency resistance mechanism in Paenibacillus riograndensis SBR5

Project description:Transcriptome analysis of Paenibacillus riograndensis SBR5. SBR5 strain was grown in sufficient iron media and limited iron media.

2015-04-11 | E-GEOD-66816 | biostudies-arrayexpress

Detailed transcriptome analysis of the plant growth promoting Paenibacillus riograndensis SBR5 using RNAseq technology

Project description:Background- The plant growth promoting rhizobacterium Paenibacillus riograndensis SBR5 is a promising candidate to serve as crop inoculant. Despite its potential regarding environmental and economic benefits, the species P. riograndensis is poorly characterized. Here, we performed for the first time a detailed transcriptome analysis of P. riograndensis SBR5 using RNAseq technology. Results- Sequence analysis of the library enriched in 5’-ends of the primary transcripts was used to identify 1,082 TSS belonging to novel transcripts and allowed us to determine a promoter consensus sequence and regulatory sequences in 5’ untranslated regions including riboswitches Conclusions- Our RNAseq analysis provides insight into the P. riograndensis SBR5 transcriptome at the systems level and will be a valuable basis for differential RNAseq analysis of this bacterium.

2017-10-25 | GSE98766 | GEO

Paenibacillus riograndensis

Project description:Paenibacillus riograndensis Transcriptome or Gene expression

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Project description:Paenibacillus riograndensis SBR5 Genome Sequencing

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Paenibacillus riograndensis strain:CAR114

Project description:Paenibacillus riograndensis strain:CAR114 Genome sequencing and assembly

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Paenibacillus riograndensis strain:CAS34

Project description:Paenibacillus riograndensis strain:CAS34 Genome sequencing and assembly

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Project description:Detailed transcriptome analysis of the plant growth promoting Paenibacillus riograndensis SBR5 using RNAseq technology

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Project description:Transcriptome analysis reveals that sporulation is used as an iron deficiency resistance mechanism in Paenibacillus riograndensis SBR5

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Complete genome sequence of Paenibacillus riograndensis SBR5(T)

Project description:Complete genome sequence of Paenibacillus riograndensis SBR5(T)

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