Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: RNA seqeuncing

PROVIDER: PRJNA719162 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14131962_1.fastq.gz	Fastqsanger.gz
	SRR14131962_2.fastq.gz	Fastqsanger.gz
	SRR14131963_1.fastq.gz	Fastqsanger.gz
	SRR14131963_2.fastq.gz	Fastqsanger.gz
	SRR14131964_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 8

Similar Datasets

Striga asiatica strain:USA

Project description:Striga asiatica RNA seqeuncing

| PRJDB8229 | ENA

Gene expression profile of hepatocellular carcinomain in Taiwan (subset 2)

Project description:In this study, we used RNA-seqeuncing to develop gene expression profile of HCC patients in Taiwan.

2022-03-01 | GSE141200 | GEO

Gene expression profile of hepatocellular carcinomain in Taiwan (subset 1)

Project description:In this study, we used RNA-seqeuncing to develop gene expression profile of HCC patients in Taiwan.

2022-03-01 | GSE141198 | GEO

RNA sequencing of total RNA from spinal cord total lysates of the PS19 tauopathy mouse model.

Project description:RNA seqeuncing was perfomed to compare transcriptomic profiles of PS19 and control mice at four and nine months.

2021-10-23 | GSE186228 | GEO

RNA sequencing from hippocampal total lysates of the rTg4510 tauopathy mouse model.

Project description:RNA seqeuncing was perfomed to compare transcriptomic profiles of rTg4510 and control at three, six and nine month time points.

2021-10-21 | GSE186140 | GEO

RNA sequencing of SRSF3 depleted pluripotent cells

Project description:RNA seqeuncing was performed to identifiy changes in genes expression and alternative splicing following SRSF3 depletion in pluripotent stem cells.

2018-05-10 | GSE113794 | GEO

miR-200c induction in Met-1 mammary carcionma cells

Project description:We performed RNA-seqeuncing analysis on mouse Met-1 cells that express miR-200c in a doxycycline (DOX)-inducible manner from the miR-200c-TripZ system.

2020-05-28 | GSE151320 | GEO

Project description:MERS-CoV direct RNA Nanopore seqeuncing

| PRJNA623312 | ENA

Deep sequencing of Drosophila melanogaster small RNAs

Project description:High throughput seqeuncing of small RNAs (PAGE isolated from total RNA or Argonaute immunoprecipitates) from Drosophila melanogaster using the Illumina platform. Adapter ligation requires 5' monophosphate and 3' OH. Full analysis of all libraries in this set is published (Czech B. et al. 2008), leading to the description of endogenous siRNAs in flies. Keywords: Solexa sequences

2008-04-30 | GSE11086 | GEO

BBBomics - Human Blood Brain Barrier Transcriptomics Hub [RNA-seq]

Project description:Functional and structural dysfunction of the blood brain barrier (BBB) leads to severe alterations in brain physiology and is believed to trigger neurodegeneration. To investigate the molecular mechanisms driving the BBB dysfunction, very few human BBB cell culture models are available; of which, the human microvascular endothelial cell line (hCMEC/D3) is the most widely used. Thus far, array-based approaches or targeted seqeuncing based approaches have been employed to characterize the gene expression of the hCMEC/D3 model. However,The goal of this study is to perform deep transcriptomic sequencing of the BBB cell line and obtain features like gene expression, expressed single nucleotide variants, alternate splice forms, circular RNAs, long non-coding RNAs and micro RNAs. We have developed blood brain barriers transcriptomics landscape using RNA sequencing and micro RNA seqeuncing data obtained from replicates of hCMEC/D3 BBB cell line.

2016-03-17 | E-GEOD-76528 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data