Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Profiling of H3K27me3 positioning in primary erythroid cells by CUT&RUN

ABSTRACT: Profiling of H3K27me3 positioning in primary erythroid cells by CUT&RUN

PROVIDER: PRJNA719371 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14135200_1.fastq.gz	Fastqsanger.gz
	SRR14135200_2.fastq.gz	Fastqsanger.gz
	SRR14135201_1.fastq.gz	Fastqsanger.gz
	SRR14135201_2.fastq.gz	Fastqsanger.gz
	SRR14135202_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 200

Similar Datasets

Profiling of H3K27me3 positioning in primary erythroid cells by CUT&RUN

Project description:The chromatin landscape of developing erythroblasts changes dramatically during differentiation. We have profiled the localisation of H3K27me3 in primary erythroid cells entering terminal differentiation using CUT&RUN.

2022-10-31 | GSE171386 | GEO

Profiling of H3K27ac positioning in primary erythroid cells by CUT&RUN

Project description:Profiling of H3K27ac positioning in primary erythroid cells by CUT&RUN

| PRJNA719370 | ENA

Profiling of H3K4me1 positioning in primary erythroid cells by CUT&RUN

Project description:Profiling of H3K4me1 positioning in primary erythroid cells by CUT&RUN

| PRJNA719372 | ENA

Profiling of H3K4me3 positioning in primary erythroid cells by CUT&RUN

Project description:Profiling of H3K4me3 positioning in primary erythroid cells by CUT&RUN

| PRJNA719374 | ENA

Profiling of H3K4me3 positioning in primary erythroid cells by CUT&RUN

Project description:The chromatin landscape of developing erythroblasts changes dramatically during differentiation. We have profiled the localisation of H3K4me3 in primary erythroid cells entering terminal differentiation using CUT&RUN.

2022-10-31 | GSE171388 | GEO

Profiling of H3K4me1 positioning in primary erythroid cells by CUT&RUN

Project description:The chromatin landscape of developing erythroblasts changes dramatically during differentiation. We have profiled the localisation of H3K4me1 in primary erythroid cells entering terminal differentiation using CUT&RUN.

2022-10-31 | GSE171387 | GEO

CUT&RUN analysis for NOP16-mediated H3K27me3 alteration in MDA-MB231 cells [CUT&RUN-seq]

Project description:The goal of CUT&RUN-seq is to identify the global alteration of H3K27me3 levels by NOP16 overexpression or deletion in triple negative breast cancer cell line MDA-MB231 cells. Three (or Two) biological replicates were assigned for each group and in total 6 groups were prepared for these CUT&RUN-seq libraries. We mapped about 20 million reads per sample to hg38 human reference genome, and counted and normalized each reads number and identified H3K27me3 distribution.

2023-12-31 | GSE192496 | GEO

Profiling of Gata2 binding in primary erythroid cells by CUT&RUN

Project description:The chromatin landscape of developing erythroblasts changes dramatically during differentiation. We have profiled the change in Gata2 binding in primary erythroid cells entering terminal differentiation using CUT&RUN.

2022-06-27 | GSE171384 | GEO

Profiling of Gata1 binding in primary erythroid cells by CUT&RUN

Project description:The chromatin landscape of developing erythroblasts changes dramatically during differentiation. We have profiled the change in Gata1 binding in primary erythroid cells entering terminal differentiation using CUT&RUN.

2022-06-27 | GSE171383 | GEO

CUT&RUN-seq of H3K4me3, H3K27me3 and H3K27ac in mll2wt and mll2[Y2602A] mESC

Project description:CUT&RUN-seq of H3K4me3, H3K27me3 and H3K27ac in mouse ESCs carrying a homozygous point mutation in the catalytic domain of mll2[Y2602A]. CUT&RUN was performed according to Skene & Henikoff, 2017 and purified DNA was using for library preparation with NEBNext DNA Ultra II kit (NEB E7645S; input: 5 ng of DNA). Libraries were multiplexed and sequenced on a NextSeq500 (Paired-End; read length 40). Each sample is present in 3 biological replicates.

2023-11-15 | E-MTAB-13466 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data