Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Genome-wide enhancer analysis reveals the role of AP-1 transcription factor in head and neck squamous cell carcinoma

ABSTRACT: Genome-wide enhancer analysis reveals the role of AP-1 transcription factor in head and neck squamous cell carcinoma

PROVIDER: PRJNA722952 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14272973_1.fastq.gz	Fastqsanger.gz
	SRR14272973_2.fastq.gz	Fastqsanger.gz
	SRR14272974_1.fastq.gz	Fastqsanger.gz
	SRR14272974_2.fastq.gz	Fastqsanger.gz
	SRR14272975_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 48

Similar Datasets

Gene expression profiles of head and neck squamous cell carcinoma

Project description:Sage performed on microdissection of Head and Neck tumor, and Head and Neck normal tissue comparative analysis of gene expression profiles of head and neck squamous cell carcinoma and Head and Neck normal tissue

2008-09-30 | E-GEOD-11986 | biostudies-arrayexpress

Gene expression profiles of Head & Neck Squamous and Lung Squamous Cancers

Project description:The differential diagnosis between head & neck squamous cell carcinomas and lung squamous cell carcinomas is often unresolved because the histologic appearance of these two tumor types is similar. In the development of a gene expression profile test (GEP-HN-LS) that distinguishes these 2 cancer types, a collection of poorly differentiated primary and metastatic tumor specimens were used. Here we describe 76 such tumor specimens that were used for validation of GEP-HN-LS. The specimens are either head & neck squamous cell carcinomas or lung squamous cell carcinomas.

2013-03-10 | GSE44170 | GEO

Gene expression profiles of Head & Neck Squamous and Lung Squamous Cancers

2013-03-10 | E-GEOD-44170 | biostudies-arrayexpress

Head and neck squamous cell carcinoma extracelular vesicles proteome LC-MS

Project description:Monitoring of changes in the proteomic composition of extracellular vesicles produced by head and neck squamous cell carcinoma cells after exposure to agents affecting autophagic and lysosomal processes. LC-MS analysis of phosphatidylserine-positive budding EVs.

2023-05-25 | PXD037164 | Pride

Genome-wide enhancer analysis reveals the role of AP-1 transcription factor in head and neck squamous cell carcinoma [ChIP-Seq]

Project description:Head and neck squamous cell carcinoma (HNSCC) is one of the most common types of human cancer. It causes significant morbidity and mortality, with a low 5-year survival rate. we used ChIP-Seq to analyze the tumor and normal tissues of the head of the Tgfbr1/Pten 2cKO mouse model. we use H3K4me1 ChIP-Seq and H3K27ac ChIP-Seq, combined with transcriptome analysis, to find different active enhancers in tumor and normal tissues.

2021-07-30 | GSE172321 | GEO

Transcription profiling of human squamous cell carcinoma of head and neck

Project description:Gene Expression Analysis of Squamous Cell Carcinoma of Head and Neck

2008-06-12 | E-GEOD-2326 | biostudies-arrayexpress

scRNA-sequencing from HPV-positive head and neck squamous cell carcinomas

Project description:We report single cell transcriptome data from HPV-positive head and neck squamous cell carcinoma patients

2023-06-20 | GSE173468 | GEO

Genome-wide enhancer analysis reveals the role of AP-1 transcription factor in head and neck squamous cell carcinoma [RNA-Seq]

Project description:Head and neck squamous cell carcinoma (HNSCC) is one of the most common types of human cancer. It causes significant morbidity and mortality, with a low 5-year survival rate. we used RNA-Seq to analyze the tumor and normal tissues of the head of the Tgfbr1/Pten 2cKO mouse model. RNA-Seq analysis found enhanced keratinization, cell proliferation, angiogenesis, inflammation and immune response, TNF signaling pathway, NF-kappa B signaling pathway, and p53 signaling pathway in tumor tissues，which ultimately contribute to HNSCC progression.

2021-07-30 | GSE172322 | GEO

MiRNA array based, miRNA expression profiles of head and neck squamous cell carcinoma patients

Project description:MiRNA expression profiles were successfully examined through expression profiling of a total of 656 miRNAs between 2 head and neck squamous cell carcinoma (HNSCC) tissues (C) and their paired adjacent normal mucousal tissues (AN). In the study presented here, 2 head and neck squamous cell carcinoma (HNSCC) tissues (C) and their paired adjacent normal mucousal tissues (AN) were examined by miRNA array

2011-09-14 | E-GEOD-32115 | biostudies-arrayexpress