Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli strain:K-12 MG1655

ABSTRACT: Experimental Evolution of Copper Resistance in Escherichia coli

PROVIDER: PRJNA730301 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14585607_1.fastq.gz	Fastqsanger.gz
	SRR14585607_2.fastq.gz	Fastqsanger.gz
	SRR14585608_1.fastq.gz	Fastqsanger.gz
	SRR14585608_2.fastq.gz	Fastqsanger.gz
	SRR14585609_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 60

Similar Datasets

Escherichia coli strain:K-12 MG1655

Project description:Experimental Evolution of Gallium Resistance in Escherichia coli

| PRJNA521749 | ENA

Escherichia coli strain:K-12 MG1655

Project description:Experimental Evolution of Magnetite Nanoparticle Resistance in Escherichia coli

| PRJNA694183 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Experimental Evolution of Silver Resistance in Escherichia coli

| PRJNA299495 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Escherichia coli experimental evolution genome sequencing

| PRJNA297127 | ENA

Escherichia coli str. K-12 substr. MG1655

Project description:Experimental evolution of antibiotic resistant Escherichia coli

| PRJNA295648 | ENA

RNA-seq of Escherichia coli K-12 MG1655 and Stx2 phage lysogens

Project description:Here, we investigated the impact of Stx2 phage carriage on Escherichia coli (E. coli) K-12 MG1655 host gene expression. Using quantitative RNA-seq analysis, we compared the transcriptome of naïve MG1655 and the lysogens carrying the Stx2 phage of the 2011 E. coli O104:H4 outbreak strain or of the E. coli O157:H7 strain PA8, which share high degree of sequence similarity.

2019-06-17 | GSE126710 | GEO

Expression analysis of Escherichia coli MG1655 K-12 WT and ∆arcA mutant

Project description:Investigation of whole genome gene expression level changes in a Escherichia coli MG1655 K-12 ∆arcA mutant, compared to the wild-type strain. The mutations engineered into this strain produce a strain lacking the ArcA protein. The results are further described in the manuscript The response regulator ArcA uses a diverse binding site architechture to globally regulate carbon oxidation in E. coli

2013-10-17 | GSE46412 | GEO

Expression analysis of Escherichia coli MG1655 K-12 WT and ∆fnr mutant

Project description:Investigation of whole genome gene expression level changes in a Escherichia coli MG1655 K-12 ?fnr mutant, compared to the wild-type strain. The mutations engineered into this strain produce a strain lacking the FNR protein. WT strains were grown under aerobic and anaerobic growth conditions.

2013-06-20 | GSE41189 | GEO

Comparison of Escherichia coli K-12 tynA- with wild type Escherichia coli K-12

Project description:Escherichia coli (E. coli) amine oxidase (ECAO) encoded by tynA gene has been one of the model enzymes to study the mechanism of oxidative deamination of amines to the corresponding aldehydes by amine oxidases. The biological roles of ECAO have been less addressed. Therefore we have constructed a gene deletion Escherichia coli K-12 strain, E. coli tynA-, and used the microarray technique to address its function by comparing the total RNA gene expression to the one of the wt. Our results suggest that tynA is a reserve gene for stringent environmental conditions and its gene product ECAO a growth advantage compared to other bacteria due to H2O2 production.

2015-09-30 | GSE65385 | GEO

Comparative transcriptomic response analysis of Escherichia coli K-12 MG1655 to nine antibiotics

Project description:To investigate and compare transcriptomic changes of Escherichia coli K-12 MG1655, the bacterium was exposed to nine antibiotics (tetracycline, mitomycin C ,imipenem, ceftazidime, kanamycin, ciprofloxacin, polymyxin E, erythromycin, and chloramphenicol) , and RNA-Seq was performed to determine comparative transcriptomic changes.

2023-01-24 | GSE220559 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data