Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Gallus gallus

ABSTRACT: Caecal microbial communities of layer and broiler line chickens and their F1 layer x broiler cross

PROVIDER: PRJNA732245 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14663200_1.fastq.gz	Fastqsanger.gz
	SRR14663200_2.fastq.gz	Fastqsanger.gz
	SRR14663201_1.fastq.gz	Fastqsanger.gz
	SRR14663201_2.fastq.gz	Fastqsanger.gz
	SRR14663202_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 66

Similar Datasets

Transcription profiling of breast tissue from chickens with low and high body weights

Project description:A study of a marked QTL affecting body weight segregating in an inter-cross of a broiler and layer chickens. QTL genotypes were inferred on flanking markers and RNA from breast tissue of birds with alternative QTL genotypes was hybridized onto microarrays

2010-07-20 | E-TABM-475 | biostudies-arrayexpress

Gallus gallus

Project description:Differential gene expression in the bone marrow of 60 week old layer and broiler chickens

| PRJNA104999 | ENA

Gallus gallus

Project description:Differential gene expression in the bone marrow of 15 week old layer and broiler chickens

| PRJNA104997 | ENA

Mouse caecum vs faeces - Metaproteogenomics Reveals Taxonomic and Functional Changes between Cecal and Fecal Microbiota in Mouse

Project description:We compared the microbiota of paired mouse caecal contents and faeces by applying a multi-omic approach, including 16S rDNA sequencing, shotgun metagenomics, and shotgun metaproteomics. The aim of the study was to verify whether faecal samples are a reliable proxy for the mouse colonic luminal microbiota, as well as to identify changes in taxonomy and functional activity between caecal and faecal microbial communities, which have to be carefully considered when using stool as sample for mouse gut microbiota investigations.

2017-03-31 | PXD004911 | Pride

Gallus gallus gallus

Project description:Base interactions of multiple source broiler chickens raw sequence reads

| PRJNA759337 | ENA

MicroRNA profiling associated with muscle growth in modern broilers compared to an unselected chicken breed

Project description:We recently performed global gene expression in the breast muscles of modern broiler and foundation line chickens. In this study, we have peformed miRNA expression analyses in the same tissues to identify muscle specific miRNAs that could be regulatory factors for muscle growth and feed efficiency in chickens.

2018-09-07 | GSE119528 | GEO

A transcriptomics approach to compare transcriptomes of individual methylotrophs from Lake Washington sediment in artificial communities and in pure cultures.

Project description:We established simple synthetic microbial communities in a microcosm model system to determine the mechanisms that underlay cross-feeding in microbial methane-consuming communities. Co-occurring strains from Lake Washington sediment were used that are involved in methane consumption, a methanotroph and two non-methanotrophic methylotrophs.

2016-12-26 | GSE85736 | GEO

Microbiota profiling of caecal contents from conventional chickens beetween 7 and 21 days of age

Project description:Here we tracked the development of the caecal microbiota in conventional White leghorn chickens of the PA2 line kept in isolators for 7 14 or 21 days using 16S sequencing.

2024-08-28 | E-MTAB-14270 | biostudies-arrayexpress

Gallus gallus

Project description:Differential Gene Expression Profiles in Broiler Chickens with Gangrenous Dermatitis (GD)

| PRJNA131937 | ENA

Differential gene expression in the bone marrow of 15 week old layer and broiler chickens

Project description:Osteoporosis is a major problem for the laying hen industry due to welfare issues and economic losses related to bone fractures. The objective of this research was to better understand genetic influences on bone integrity by comparing gene expression profiles from bone marrow of chickens expressing phenotypic differences for a number of bone characteristics. Global expression profiles of genes included on the Fred Hutchinson Cancer Research Center (FHCRC) Chicken 13K array were assessed in broiler and layer chickens. Keywords: Gene expression comparison between two chicken lines at 15 weeks of age

2007-01-01 | GSE6268 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data