Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Cyclic dinucleotide stimulation of Nematostella vectensis

ABSTRACT: Cyclic dinucleotide stimulation of Nematostella vectensis

PROVIDER: PRJNA734503 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14711000.fastq.gz	Fastqsanger.gz
	SRR14711001.fastq.gz	Fastqsanger.gz
	SRR14711002.fastq.gz	Fastqsanger.gz
	SRR14711003.fastq.gz	Fastqsanger.gz
	SRR14711004.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 56

Similar Datasets

Cyclic dinucleotide stimulation of Nematostella vectensis

Project description:In mammals, the cGAS-cGAMP-STING pathway is crucial for sensing viral infection and initiating an anti-viral type I interferon response. cGAS and STING are highly conserved genes that originated in bacteria and are present in most animals. By contrast, interferons only emerged in vertebrates; thus, the function of STING in invertebrates is unclear. Here, we use the STING ligand 2'3'-cGAMP to activate immune responses in a model cnidarian invertebrate, the starlet sea anemone Nematostella vectensis. Using RNA-Seq, we found that 2'3'-cGAMP induces robust transcription of both anti-viral and anti-bacterial genes, including the conserved transcription factor NF-κB. Knockdown experiments identified a role for NF-κB in specifically inducing anti-bacterial genes downstream of 2'3'-cGAMP, and some of these genes were also found to be induced during Pseudomonas aeruginosa infection. Furthermore, we characterized the protein product of one of the putative anti-bacterial genes, the N. vectensis homolog of Dae4, and found that it has conserved anti-bacterial activity. This work describes an unexpected role of a cGAMP sensing pathway in anti-bacterial immunity and suggests that a broad transcriptional response is an evolutionarily ancestral output of 2'3'-cGAMP signaling in animals.

2021-06-03 | GSE175984 | GEO

Nematostella vectensis

Project description:Nematostella vectensis RAD sequencing

| PRJNA170681 | ENA

Nematostella vectensis

Project description:Nematostella vectensis Genome sequencing

| PRJNA337090 | ENA

Geographical temperature stress in the sea anemone Nematostella vectensis

Project description:Gene expression of Nematostella vectensis from 5 different locations under chronic (30 day) temperature stress

2020-01-24 | GSE144104 | GEO

Nematostella vectensis

Project description:Nematostella vectensis Raw sequence reads