Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Nitrates increase abscisic acid levels to regulate haustoria formation in the parasitic plant Phtheirospermum japonicum

ABSTRACT: Nitrates increase abscisic acid levels to regulate haustoria formation in the parasitic plant Phtheirospermum japonicum

PROVIDER: PRJNA737113 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14794100_1.fastq.gz	Fastqsanger.gz
	SRR14794100_2.fastq.gz	Fastqsanger.gz
	SRR14794101_1.fastq.gz	Fastqsanger.gz
	SRR14794101_2.fastq.gz	Fastqsanger.gz
	SRR14794102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 132

Similar Datasets

Nitrates increase abscisic acid levels to regulate haustoria formation in the parasitic plant Phtheirospermum japonicum

Project description:Transcriptomic changes during haustoria formation in the parasitic plant Phtheirospermum japonicum. We performed RNAseq on Phtheirospermum japonicum seedling infecting and not infecting over 5 time points during haustoria formation for the control treatment and over 3 time points for the ammonium nitrate and 6-Benzylaminipurine. We investigated the transcriptomic changes during haustoria formation and how this is affected in the transcritpome level by nitrate and cytokinin treatment.

2022-05-17 | GSE177484 | GEO

Root transcriptome of the facultative parasitic plant Phtheirospermum japonicum

Project description:47,984 unigenes with putative coding regions with at least 50 amino acids were selected from whole transcriptome (SAMN03271814) of Phtheirospermum japonicum Microarray slides were hybridized with labeled cRNA from roots of 2-week-old Phtheirospermum japonicum plants growing axenically and treated with haustoria-inducer DMBQ (10 µM) for 0, 0.5, 1, 3, 6, 12, 24 and 48 h

2015-05-31 | GSE65723 | GEO

Phtheirospermum japonicum

Project description:Root transcriptome of the facultative parasitic plant Phtheirospermum japonicum

| PRJNA274795 | ENA

Phtheirospermum japonicum cultivar:Okayama

Project description:Transcriptome of facultative parasitic plant Phtheirospermum japonicum

| PRJNA604993 | ENA

Phtheirospermum japonicum

Project description:Phtheirospermum japonicum overview

| PRJNA383756 | ENA

Phtheirospermum japonicum

Project description:Phtheirospermum japonicum and Oryza sativa, RNA-seq data

| PRJNA437192 | ENA

Phtheirospermum japonicum strain:Okayama

Project description:Phtheirospermum japonicum RNAseq

| PRJDB10085 | ENA

Phtheirospermum japonicum strain:OKAYAMA

Project description:Phtheirospermum genome sequence

| PRJDB3858 | ENA

Phtheirospermum japonicum strain:Okayama

Project description:Whole genome sequence of Phtheirospermum japonicum ethylene related mutants

| PRJDB10374 | ENA

An artificial host system enables the obligate parasitic plant Cuscuta campestris to grow and complete its life cycle in vitro

Project description:Cuscuta campestris is an obligate parasitic plant that requires a host to complete its lifecycle. Parasite-host connections occur via an haustorium, a unique organ that acts as a bridge for the uptake of water, nutrients and macromolecules. Research on Cuscuta is often complicated by host influences, but comparable systems for growing the parasite in the absence of a host do not exist. We developed an axenic method to grow C. campestris on an Artificial Host System (AHS). We evaluated the effects of nutrients and phytohormones on parasite haustoria development and growth. Haustorium morphology and gene expression were characterized. The AHS consists of an inert, fibrous stick that mimics a host stem, wicking water and nutrients to the parasite. It enables C. campestris to exhibit a parasitic habit and develop through all stages of its lifecycle, including production of new shoots and viable seeds. Phytohormones NAA and BA affect haustoria morphology, and increase parasite fresh weight and biomass. Gene expression in AHS haustoria reflect process similar to those in haustoria on actual host plants. The AHS is a methodological improvement for studying Cuscuta biology by avoiding specific host effects on parasite and giving researchers full control of the parasite environment.

2022-06-07 | GSE178396 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data