Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Bacteriophage sp.

ABSTRACT: Computational and Experimental Resources for Virome Analysis in Inflammatory Bowel Disease (CERVAID)

PROVIDER: PRJNA737576 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15364500_1.fastq.gz	Fastqsanger.gz
	SRR15364501_1.fastq.gz	Fastqsanger.gz
	SRR15364502_1.fastq.gz	Fastqsanger.gz
	SRR15364503_1.fastq.gz	Fastqsanger.gz
	SRR15364504_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 86

Similar Datasets

human metagenomic

Project description:The colonic virome in inflammatory bowel disease

| PRJNA1004560 | ENA

Homo sapiens

Project description:Inflammatory bowel disease

| PRJNA87281 | ENA

mouse gut metagenome

Project description:Virome features in two mouse models of inflammatory bowel disease

| PRJNA938068 | ENA

Colonic tissues from an acute TNBS-induced colitis model in SJL mice.

Project description:Experimental colitis is often used as a model for the inflammatory bowel diseases, ulcerative colitis and Crohn’s disease. Results identify the inflammatory processes during acute colitis in affected tissues from TNBS-treated susceptible 5-7 week old SJL mice. Keywords: Disease state analysis

2008-09-08 | GSE12139 | GEO

Colonic tissues from an acute TNBS-induced colitis model in SJL mice.

2008-09-08 | E-GEOD-12139 | biostudies-arrayexpress

Homo sapiens

Project description:Inflammatory bowel disease (HG-U133A)

| PRJNA87261 | ENA

Homo sapiens

Project description:Inflammatory bowel disease (HG-U133B)

| PRJNA87263 | ENA

Comparative analysis of gut bacteriophage between older and young people

Project description:Given the gut microbiota involve aging processing, we performed comparative analysis of gut bacteriophage between older and young subjects using next-generation sequencing (NGS). In our previous study, we found that the Ruminococcaceae is higher in aged subjects comparing to young one. To identify the bacteriophage targeting to the Ruminococcaceae, we also access the composition of phage in the Ruminococcaceae (ATCC, TSD-27) after incubated with human stool samples. The Lactobacillus (ATCC, LGG) targeting phage was used as the control. The virome sequencing analysis using NGS indicated that Myoviridae are high enrich in young subjects and predominate in TSD-27 targeting phage.

2022-07-20 | GSE196622 | GEO

Functional Proteomic Profiling of Secreted Serine Proteases in Health and Inflammatory Bowel Disease

Project description:Dysregulated proteolysis plays a pivotal role in the pathophysiology of inflammatory bowel disease. Nonetheless, the identity of overactive proteases released by human colonic mucosa remains unknown. Herein, we employed a serine protease-targeted activity-based probe (ABP) coupled with mass spectral analysis to identify active forms of proteases secreted by the colonic mucosa of healthy volunteers and inflammatory bowel disease patients. With this approach, we identified seven active serine proteases: cathepsin G, plasma kallikrein, plasmin, tryptase, chymotrypsin-like elastase 3A, aminopeptidase B, and thrombin. Furthermore, cathepsin G and thrombin were overactive in supernatants from inflammatory bowel disease patients once compared to healthy volunteers.

2018-05-18 | PXD009450 | Pride

Comparative Genomic Analysis of isolates obained from Inflammatory Bowel Disease Patients

Project description:CGH analysis of isolates obtained from inflammatory bowel disease isolates

2012-01-02 | E-MEXP-3090 | biostudies-arrayexpress