Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Comamonas sp. NLF-1-9 isolate:livestock wastewater

ABSTRACT: Comamonas sp. NLF-1-9 isolate:livestock wastewater Genome sequencing

PROVIDER: PRJNA741732 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
		Other

Items per page:

1 - 1 of 1

Similar Datasets

Pathway-specific tuning mechanisms in the metabolism of lignin and plastic aromatic carbons in Comamonas testosteroni

Project description:Widely reported discrepancies between metabolic flux and transcripts or enzyme levels in bacterial metabolism imply complex regulation mechanisms need to be considered, especially in new bacterial platforms for bioremediation and bioproduction. Comamonas testosteroni strains, which metabolize various natural and xenobiotic aromatic compounds, represent such platforms whose metabolic regulations are still unknown. Here, we identify analogous multi-level regulation mechanisms in the metabolism of two lignin-related (4-hydroxybenzoate and vanillate) and one plastic-related (terephthalate) aromatic compounds in C. testosteroni KF-1, a wastewater isolate. Transcription-level regulation controlled initial catabolism and cleavage of the compounds, but subsequent carbon fluxes in central carbon metabolism are governed by metabolite-level thermodynamic regulation. Quantitative 13C-fingerprinting of tricarboxylic acid cycle and cataplerotic reactions elucidate key carbon routing that is not evident from enzyme abundance changes. Therefore, as-needed transcriptional activation of aromatic catabolism is coupled with metabolic fine-tuning of central metabolism, thus delineating pathway candidates for different metabolic manipulations.

2022-11-17 | GSE192852 | GEO

Cellulosimicrobium sp. 72-3 isolate:livestock

Project description:Cellulosimicrobium sp. 72-3 isolate:livestock Genome sequencing

| PRJNA629416 | ENA

Comamonas flocculans strain:NLF 7-7

Project description:Comamonas flocculans strain:NLF 7-7 Genome sequencing

| PRJNA555370 | ENA

Comamonas

Project description:Comamonas sp. overview

| PRJNA192726 | ENA

Comamonas sp. F1-6 isolate:1

Project description:Comamonas sp. F1-6 isolate:1 Genome sequencing