Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: seedling transcriptome

PROVIDER: PRJNA741840 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR14933517_1.fastq.gz	Fastqsanger.gz
	SRR14933517_2.fastq.gz	Fastqsanger.gz
	SRR14933518_1.fastq.gz	Fastqsanger.gz
	SRR14933518_2.fastq.gz	Fastqsanger.gz
	SRR14933519_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Project description:Seedling transcriptome

| PRJNA608253 | ENA

Project description:seedling transcriptome

| PRJNA741853 | ENA

Zea mays B73 stress treatments on UA 70mer oligo slides (Maize oligo array version 1.3 array A and B)

Project description:Maize seedling transcriptome responses to six abiotic perturbations (heat, cold, darkness, desiccation, salt, UV-B) and 2 controls were analyzed Keywords: comparitive transcriptome profiling

2008-06-01 | GSE9453 | GEO

Genome-wide analysis of transcriptome and histone modifications in Brassica napus hybrids [ChIP-seq]

Project description:We integrated data of transcriptome and histone modifications (H3K4me3 and H3K27me3) for HZ62 in three tissue types (seedling, flower bud and silique).Histone modifications analysis suggested there was histone modifications reprogramming in the B. napus hybrids compeared with parents.

2023-07-18 | GSE218583 | GEO

Gene expression profiling of ramie roots during hydroponic induction and adaption to aquatic environment

Project description:Transcriptome analysis of root development related genes in terrestrial and hydroponic ramie. Ramie seedlings were cultivated in soil, and in hydroponic with the shoot-cutting propagation method. The root samples from hydrophonic ramie were collected from the early stage (5-day-old seedling) and the late stage (30-day-old seedling) of acquatic roots induction. The roots of ramie seedling cultivated in soil were also collected for comparative analysis. Our study represents the detailed analysis of ramie root transcriptomes with biologic replicates.

2017-09-15 | GSE98903 | GEO

Transcriptome analysis of BPH-resistant and BPH-susceptible rice seedlings in response to BPH infestation

Project description:Transcriptome analysis of BPH-resistant and BPH-susceptible rice seedlings in response to BPH infestation. RH vs. 02428: a microarray analysis of genes that were differentially expressed in a BPH-resistant cultivar, Rathu Heenati (RH) and a susceptible cultivar 02428 after infestation with BPH for 24h. RB vs. SB: a microarray analysis of genes that were differentially expressed in resistant seedling pool and susceptible seedling pool both infested with BPH for 24h. RB vs. RN: a microarray analysis of genes that were differentially expressed in resistant seedling pool infested with BPH for 24h and resistant seedling pool without BPH infestation. Goal was to explore the molecular basis underlying BPH-resistance in rice.

2019-11-19 | GSE140562 | GEO

Project description:WT seedling transcriptome

| PRJNA742504 | ENA

Infection of Arabidopsis thaliana seedlings (Col-0, UBQ10::YFP-TCP14-4, tcp14-6 and coi1-16) with the Pseudomonas syringae strain DC3000 cor-

Project description:This study evaluates the transcriptome of four genotypes of Arabidopsis thaliana infected at the seedling stage with the Pseudomonas syringae strain DC3000 cor-.

2017-01-12 | GSE90075 | GEO

Genome-wide analysis of transcriptome and histone modifications in Brassica napus hybrids [RNA-seq]

Project description:We integrated data of transcriptome and histone modifications (H3K4me3 and H3K27me3) for HZ62 in three tissue types (seedling, flower bud and silique). Transcriptome analysis suggested that gene expression level altered in hybrids compared with parents.

2023-07-18 | GSE218591 | GEO

Transcriptome of cassava seedling under different treatments

Project description:Transcriptome of cassava seedling were analysised in 7% PEG and 50 μmol of ABA by RNA-seq.The goal of this study was to compare the phenotypic and transcriptome differences between treatment and WT plants, and to analyze how treatment changed the expression patterns.

2020-08-22 | GSE156638 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data