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ABSTRACT: Frankliniella occidentalis (western flower thrips) larval gut response to tomato spotted wilt virus

PROVIDER: PRJNA748697 | ENA |

REPOSITORIES: ENA

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			Action	DRS
	SRR15207603_1.fastq.gz	Fastqsanger.gz
	SRR15207603_2.fastq.gz	Fastqsanger.gz
	SRR15207604_1.fastq.gz	Fastqsanger.gz
	SRR15207604_2.fastq.gz	Fastqsanger.gz
	SRR15207605_1.fastq.gz	Fastqsanger.gz

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Project description:Transcriptome response of Frankliniella occidentalis (western flower thrips) to tomato spotted wilt virus (TSWV) infection

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Tolerance of Arabidopsis to thrip feeding

Project description:We analyzed the interaction between Arabidopsis and western flower thrips (Frankliniella occidentalis), which are one of the most serious insect pests of cultivated plants. A total of 1.2K potential biotic and abiotic stress-related genes were selected from the genes covered by the Arabidopsis 7K array (RIKEN, Japan) and Arabidopsis oligo microarray (Agilent Technologies, USA) for this study. The 21- day-old plants were feeded by western flower thrips in an acryl cylinder chamber with air ventilation windows covered with a fine mesh. Leaves were harvested several time after the feeding. Our results indicate that JA plays an important role in Arabidopsis in terms of response to, and tolerance against, thrip feeding.

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Project description:Tomato spotted wilt virus (TSWV), transmitted by small insects known as thrips, is one of the major threats to tomato productivity across the globe. In addition to tomato, this virus infects more than 1000 other plants belonging to 85 families and is a cause of serious concern. Very little, however, is known about the molecular mechanim of TSWV induced signaling in plants. Here, we used a TMT-based quantitative proteome analysis to investigate the protein profiles of tomato leaves of two cultivars (cv 2621and 2689; susceptible and resistant respectively to TSWV infection) following TSWV inoculation. This approach resulted in the identification of 5112 proteins of which 1022 showed significant changes in response to TSWV. While the proteome of resistant cultivar majorly remain unaltered, proteome of susceptible cultivar showed distint differences following TSWV infection. TSWV modulated proteins in tomato included those with functions previously implicated in plant defence incuding secondary metabolism, ROS detoxification, MAP kinase signaling, Calcium signaling and jasmonate biosynthesis, among others. Taken together, these results provide new insights into the TSWV induced signaling in tomato leaves and may be useful in future to manage this deadly disease of plants.

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Project description:Tomato spotted wilt virus

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