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Sepiella japonica

ABSTRACT: Raw testes and ovarian transcriptome sequencing data from Sepiella Japonica

PROVIDER: PRJNA749148 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
	SRR15222789.fastq.gz	Fastqsanger.gz
	SRR15222790.fastq.gz	Fastqsanger.gz
	SRR15222791.fastq.gz	Fastqsanger.gz
	SRR15222792.fastq.gz	Fastqsanger.gz
	SRR15222793.fastq.gz	Fastqsanger.gz

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De novo Assembly and Characterization of Swertia japonica Transcriptome for the Identification of Candidate Genes Involved in the Biosynthesis of Therapeutic Metabolites

Project description:Here, we performed deep transcriptome sequencing for the aerial-tissues and the roots of S. japonica, generating over 2 billion raw reads with an average length of 101 nt by using an Illumina paired-end sequencing by HiSeq2000 platform. Using a combined approach of three popular assemblers, de novo transcriptome assembly for S. japonica was obtained, yielding in 81,729 unigenes with an average length as 884bps and N50-value as 1,452bps, with 46,963 unigenes being annotated based on the sequence similarity against NCBI-nr protein database.

2016-07-01 | GSE80057 | GEO

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