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Oidiodendron maius

ABSTRACT: Oidiodendron maius overview

PROVIDER: PRJNA74993 | ENA |

REPOSITORIES: ENA

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			Action	DRS
		Other
	SRR097413_1.fastq.gz	Fastqsanger.gz
	SRR097413_2.fastq.gz	Fastqsanger.gz
	SRR13292300.fastq.gz	Fastqsanger.gz
	SRR13292301.fastq.gz	Fastqsanger.gz

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Gene expression changes in Oidiodendron maius- Vaccinium myrtillus mycorrhizal roots compared to Oidiodendron maius free-living mycelium

Project description:Illumina HiSeq technology was used to generate mRNA profiles from Oidiodendron maius mycorrhizal roots compared to free-living mycelium . Mycorrhizal roots and control mycelium were harvested after 45 days and used for RNA extraction. Reads of 2X100bp were generated and aligned to Oidiodendron maius transcripts (http://genome.jgi-psf.org/Oidma1) using CLC Genomics Workbench 6. mRNA profiles from Oidiodendron maius mycorrhizal roots and free-living mycelium were generated by paired-end (2x100bp) Illumina HiSeq2000 sequencing. Three biological replicates were sequenced for mycorrhizal and mycelium samples.

2015-02-06 | E-GEOD-63922 | biostudies-arrayexpress

Gene expression changes in Oidiodendron maius- Vaccinium myrtillus mycorrhizal roots compared to Oidiodendron maius free-living mycelium

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Transcriptomic analysis of Oidiodendron maius free-living mycelium grown on varying carbon sources

Project description:Illumina MiSeq technology was used in a pilote project to generate mRNA profiles from Oidiodendron maius free-living mycelium grown on varying carbon sources. 75bp single reads and 75bp paired reads were generated and aligned to the O.maius reference transcripts using CLC Genomics Workbench 9.

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Transcriptomic analysis of Oidiodendron maius free-living mycelium grown on varying carbon sources

Project description:Transcriptomic analysis of Oidiodendron maius free-living mycelium grown on varying carbon sources

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Project description:Illumina HiSeq2000 technology was used to generate mRNA profiles from Oidiodendron maius free-living mycelium and Vaccinium myrtillus mycorrhizal roots with or without Cadmium treatment. 150bp reads were generated and aligned to the O.maius reference transcripts using CLC Genomics Workbench 8

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Several Characteristics of <i>Oidiodendron maius</i> G.L. Barron Important for Heather Plants' Controlled Mycorrhization.

Project description:Oidiodendron maius G.L. Barron is a recognized fungal species capable of forming ericoid mycorrhiza with various positive effects on host plants; therefore, newly found and previously uncharacterized O. maius strains may be valuable for heather plants' controlled mycorrhization. Characteristics of the O. maius F3860 strain were studied, i.e., mycelium growth on various nutrient media and the ability to secrete auxins and enzymes. O. maius F3860 grew rapidly on malt extract agar and potato dextrose agar. It was also able to grow on nutrient media suitable for heather plant cultivation. The presence of the flavonoids rutin and quercetin increased the mycelium growth rate compared to the control, starting from the 8th to the 13th days of cultivation. The ability to secrete auxins was confirmed with bioassay and thin-layer chromatography, and their content, as well as phytase activity, was estimated spectrophotometrically. Both in nutrient media with tryptophan and without it, O. maius F3860 secreted about 6 μg IAA/mL growth medium. O. maius F3860 possessed extracellular phytase, protease, and phenol oxidase activities. The investigation indicates O. maius F3860's promise for heather seedling inoculation as an approach to increase their fitness.

| S-EPMC10381259 | biostudies-literature

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