Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Limonium bicolor

ABSTRACT: Limonium bicolor Transcriptome of different leaf developmental stages

PROVIDER: PRJNA752802 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15384544_1.fastq.gz	Fastqsanger.gz
	SRR15384544_2.fastq.gz	Fastqsanger.gz
	SRR15384545_1.fastq.gz	Fastqsanger.gz
	SRR15384545_2.fastq.gz	Fastqsanger.gz
	SRR15384546_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 31

Similar Datasets

Dynamic Transcriptome in Limonium bicolor Leaf Development: Insights into Genes Controlling Salt Gland Differentiation

Project description:The salt glands in the epidermis of recretohalophytes play a pivotal role in salt tolerance by secreting excess salts from tissues. Irrespective of the importance of understanding the secretion process, nothing is known about the molecular mechanisms of salt gland development. Limonium bicolor possesses multi-cellular salt glands in the epidermis and provides a model to study salt gland development. We applied next-generation sequencing to profile early leaf development using five distinctly different developmental stages, which were quantified by successive collections of the first true leaf of L. bicolor with precise spatial and temporal resolution. Twenty-two percent of the genes were differentially expressed along the developmental gradient. Cluster analysis revealed specific expression patterns at one stage, and identified enriched functions specific for each developmental stage. Seventy-two genes were identified as highly involved in salt gland differentiation. Salt glands have high homology with trichomes, which was also confirmed by mutants with increased salt gland densities. A model is proposed to illustrate genes participating in salt gland differentiation. This unique dataset lays the foundation for identifying key genes involved in salt gland development and salt secretion, which is a requisite for understanding mechanisms that could make agriculture possible in saline areas worldwide.

2016-11-18 | GSE52549 | GEO

Limonium bicolor

Project description:Limonium bicolor Transcriptome or Gene expression

| PRJNA755152 | ENA

Limonium bicolor

Project description:Limonium bicolor Transcriptome or Gene expression

| PRJNA755159 | ENA

Limonium bicolor

Project description:Limonium bicolor Transcriptome or Gene expression

| PRJNA226748 | ENA

Limonium bicolor

Project description:Limonium bicolor Organism overview