Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: CRP

PROVIDER: PRJNA752871 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15374343_1.fastq.gz	Fastqsanger.gz
	SRR15374343_2.fastq.gz	Fastqsanger.gz
	SRR15374344_1.fastq.gz	Fastqsanger.gz
	SRR15374344_2.fastq.gz	Fastqsanger.gz
	SRR15374345_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 80

Similar Datasets

Genome-Wide High Resolution Expression Pattern of Crown Root Primordia in Rice

Project description:RNA sequencing data from laser microdissected crown root primordia (CRP) during CRP initiation (stage-I) and CRP outgrowth (stage-II) as compared to competent tissues (control)

2022-04-24 | GSE185198 | GEO

Transcriptional effects of CRP* expression in Escherichia coli

Project description:Escherichia coli exhibits diauxic growth in sugar mixtures due to CRP-mediated catabolite repression and inducer exclusion related to phosphotransferase system enzyme activity. Replacement of the native crp gene with a catabolite repression mutant (referred to as crp*) alleviates diauxic effects in E. coli and enables co-utilization of glucose and other sugars. While previous studies have examined the effects of expressing CRP* mutants on the expression of specific catabolic genes, little is known about the global transcriptional effects of CRP* expression. In this study, we compare the transcriptome of E. coli W3110 (expressing wild-type CRP) to that of mutant strain PC05 (expressing CRP*) in the presence and absence of glucose.

2009-08-12 | GSE17584 | GEO

ChIP-Seq experiment for the global regulators, CRP and Fis in early and mid exponential growth phases

Project description:We have performed ChIP-Seq experiment for the global regulators, CRP and Fis in early and mid exponential growth phases respectively in Escherichia coli K12 MG1655. The dataset contains the genome wide binding patterns of Fis and CRP in the wildtype and the mutant strains

2016-12-13 | GSE92255 | GEO

Genomic binding for cAMP responsive transcription factors, CRP (Rv3676) and Cmr (Rv1675c) in TB complex mycobacteria

Project description:We identified the genome-wide binding sites of CRP/FNR family transcription factors CRP and Cmr in M. bovis BCG using ChIP-seq, and cross-referenced these binding sites to orthologous regions in M. tuberculosis. Selected binding sites for each transcription factor were further characterized for their importance to gene regulation.

2017-10-26 | GSE106135 | GEO

Role of CRP K100 positive charge on Escherichia coli global transcriptome

Project description:We hypothesized that the positive charge of CRP K100 is important for transcription of Class II CRP-dependent genes. These data show mutations that affect K100 charge status result in genome-wide changes in transcription of both CRP-dependent and -independent genes.

2017-04-06 | GSE97406 | GEO

Systems approach elucidates convoluted transcriptional regulation on carbon metabolism [ChIP-seq]

Project description:The carbon metabolism in bacteria is regulated by two global TFs, CRP and Cra. While the regulon of CRP has been extensively studied, the complete definition of Cra has been missing. Thus, in vivo TF binding measurement with ChIP-exo and transcriptional expression measurement with RNA-seq for Cra was performed to define the Cra regulon.

2018-04-18 | GSE65641 | GEO

Transcriptional effects of CRP* expression in Escherichia coli

2009-08-21 | E-GEOD-17584 | biostudies-arrayexpress

Triticum aestivum cultivar:V1_Narmada and V2_PBW502

Project description:CRP-Wheat Biofortification

| PRJNA605691 | ENA

CRP and FIS

Project description:CRP and FIS

| PRJNA412865 | ENA

The long noncoding RNA SNHG1 promotes carboplatin resistance retinoblastoma

Project description:carboplatin resistance retinoblastoma cell lines (Weri-RB1/CRP) transfect SNHG1-specific shSNHG1 to knockdown SNHG1 and analysis differential gene in Weri-RB1/CRP

2021-04-10 | GSE171455 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data