Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Cupriavidus Pauculus typification

PROVIDER: PRJNA755721 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15511250_1.fastq.gz	Fastqsanger.gz
	SRR15511250_2.fastq.gz	Fastqsanger.gz
	SRR15511251_1.fastq.gz	Fastqsanger.gz
	SRR15511251_2.fastq.gz	Fastqsanger.gz
	SRR15511252_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 6

Similar Datasets

Cupriavidus pauculus

Project description:Cupriavidus pauculus overview

| PRJNA422926 | ENA

Cupriavidus pauculus strain:MF1

Project description:Cupriavidus pauculus strain:MF1 Genome sequencing and assembly

| PRJNA762702 | ENA

Cupriavidus pauculus strain:UM1

Project description:Cupriavidus pauculus strain:UM1 Genome sequencing and assembly

| PRJNA422679 | ENA

Cupriavidus pauculus strain:WXY105

Project description:Cupriavidus pauculus strain:WXY105 Genome sequencing and assembly

| PRJNA1097057 | ENA

Metal resistant bacterium Cupriavidus metallidurans CH34

Project description:Metal resistant bacterium Cupriavidus metallidurans CH34 uses non-conventional proteins to combat oxidative stress Keywords: Cupriavidus metallidurans; hydrogen peroxide; oxidative stress;

2014-09-13 | GSE24094 | GEO

Extracellular proteins enhance Cupriavidus pauculus nickel tolerance and cell aggregate formation

Project description:Heavy metal-resistant bacteria secrete extracellular proteins (e-PNs). However, the role of e-PNs in heavy metal resistance remains elusive. Here Fourier Transform Infrared Spectroscopy implied that N-H, C = O and NH2-R played a crucial role in the adsorption and resistance of Ni2+ in the model organism Cuprividus pauculus 1490 (C. pauculus). Proteinase K treatment reduced Ni2+ resistance of C. pauculus underlining the essential role of e-PNs. Further three-dimension excitation-emission matrix fluorescence spectroscopy analysis demonstrated that tryptophan proteins as part of the e-PNs increased significantly with Ni2+ treatment. Proteomic and quantitative real-time polymerase chain reaction data indicated that major changes were induced in the metabolism of C. pauculus in response to Ni2+. Among those lipopolysaccharide biosynthesis, general secretion pathways, Ni2+-affiliated transporters and multidrug efflux play an essential role in Ni2+ resistance. Altogether the results provide a conceptual model for comprehending how e-PNs contribute to bacterial resistance and adsorption of Ni2+.

2023-12-21 | PXD045082 | Pride

Stress response of Cupriavidus metallidurans strains (AE104 delta 7)

Project description:Response of Cupriavidus metallidurans AE104(delta zupT) mutant to Zn/EDTA stress In this study 2 different treatments were performed to acquire expression profiles of the total genome of Cupriavidus metallidurans

2015-08-01 | E-GEOD-71011 | biostudies-arrayexpress

Stress response of Cupriavidus metallidurans strains

Project description:Response of Cupriavidus metallidurans CH34, AE104 and delta zupT mutant to Zn/EDTA stress In this study 3 different treatments were performed to acquire expression profiles of the total genome of Cupriavidus metallidurans

2014-12-16 | E-GEOD-64196 | biostudies-arrayexpress

Response of Cupriavidus metallidurans CH34 to different Pt-species

Project description:Response of Cupriavidus metallidurans CH34 to cisplatin, Pt(IV)chloride and Au-NP In this study 7 different treatments were performed (first 2 as 3 replicates) to acquire expression profiles of the total genome of Cupriavidus metallidurans

2016-02-27 | E-GEOD-78723 | biostudies-arrayexpress

Response of Cupriavidus metallidurans CH34 to different Au-species

Project description:Response of Cupriavidus metallidurans CH34 to NaAuCl4, Au(I)-thiomalate, Au(I)-thiosulfate, KAuCN, (KCN as control) In this study 10 different treatments were performed (first 7 as 3 replicates) to acquire expression profiles of the total genome of Cupriavidus metallidurans

2013-03-15 | E-GEOD-42199 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data