Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Escherichia coli BL21

ABSTRACT: phosphatase A1 accessory protein PlaS on Escherichia coli BL21 Transcriptome

PROVIDER: PRJNA756888 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15602447_1.fastq.gz	Fastqsanger.gz
	SRR15602447_2.fastq.gz	Fastqsanger.gz
	SRR15602448_1.fastq.gz	Fastqsanger.gz
	SRR15602448_2.fastq.gz	Fastqsanger.gz
	SRR15602449_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 18

Similar Datasets

Time series of Escherichia coli BL21(DE3) growth curve, tiling arrays

Project description:Experimentally mapped transcriptome structure of Escherichia coli BL21(DE3) by hybridizing total RNA (including RNA species <200 nt) to genome-wide high-density tiling arrays (60 mer probes tiled every 10 nt).

2017-01-13 | GSE93565 | GEO

Time series of Escherichia coli BL21(DE3) after temperature upshift from 37°C to 42°C, tiling arrays

Project description:Heat-responsive and time-resolved changes in transcriptome of E. coli BL21(DE3) Experimentally mapped transcriptome structure of Escherichia coli BL21(DE3) by hybridizing total RNA (including RNA species <200 nt) to genome-wide high-density tiling arrays (60 mer probes tiled every 10 nt).

2020-04-12 | GSE148034 | GEO

Expression data from Escherichia coli

2006-07-07 | GSE5239 | GEO

Microaerobic fermentation alters lactose metabolism in Escherichia coli

Project description:We report the effect of oxygenation state in lactose grown escherichia coli producing recombinant proteins. To shed more light on the mechanistic correlation between the uptake of lactose and dissolved oxygen, a comprehensive study has been undertaken with the E. coli BL21 (DE3) strain. Differences in consumption pattern of lactose, metabolites, biomass and product formation due to aerobiosis have been investigated. Transcriptomic profiling of metabolic changes due to aerobic process and microaerobic process during protein formation phase has been studied and the results provide a deeper understanding of protein production in E. coli BL21 (DE3) strains with lactose based promoter expression systems.This study also provides a scientific understanding of escherichia coli metabolism upon oxygen fluctuations.

2020-05-18 | GSE135698 | GEO

Transcription profiling of E. coli BL21, BL21/pOri1 and BL21/pOri2mutants

Project description:Transcription profiles in BL21, BL21/pOri1 and BL21/pOri2 were analysed using DNA microarray technology. BL21, BL21/pOri1 or BL21/pOri2 strains were cultured at chemostat status and harvested after the cultivation arrived steady status. Experiment Overall Design: BL21, BL21/pOri1 and BL21/pOri2 were cultured at the exponential growth status or at the same growth rate status, respectively. E. coli BL21, BL21/pOri1 and BL21/pOri2 RNAs were reverse-transcripted into cDNAs, The RNAs from the BL21, BL21/pOri1, BL21/pOri2 were labelled with biotin. The labelled cDNAs were mixed and then hybridized on the microarray slides. Experiments were repeated four times. Most of them have no significant difference comparing plasmid-carrying E. coli and plasmid-free E. coli

2008-06-13 | E-GEOD-5239 | biostudies-arrayexpress

Escherichia coli BL21

Project description:Escherichia coli Bl21 _ter operon_UV resistance

| PRJNA655930 | ENA

Escherichia coli BL21(DE3)

Project description:Escherichia coli BL21(DE3) Genome sequencing

| PRJNA730534 | ENA

Escherichia coli BL21(DE3)

Project description:Escherichia coli BL21(DE3) Genome sequencing

| PRJNA203015 | ENA

Escherichia coli strain:BL21 (DE3)

Project description:Escherichia coli BL21 (DE3) Resequencing