Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Macaca mulatta Tupaia belangeri

ABSTRACT: Transcriptomes of macaca mulatta and tupaia belangeri

PROVIDER: PRJNA761017 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR24144000_1.fastq.gz	Fastqsanger.gz
	SRR24144000_2.fastq.gz	Fastqsanger.gz
	SRR24144001_1.fastq.gz	Fastqsanger.gz
	SRR24144001_2.fastq.gz	Fastqsanger.gz
	SRR24144002_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 168

Similar Datasets

Tupaia belangeri

Project description:Single cell transcriptomes of fetal brain of tupaia belangeri

| PRJNA761023 | ENA

Tupaia belangeri

Project description:Tupaia belangeri Raw sequence reads

| PRJNA432640 | ENA

Tupaia belangeri

Project description:Tupaia belangeri Transcriptome or Gene expression

| PRJNA1046675 | ENA

Tupaia belangeri

Project description:Tupaia belangeri (northern tree shrew) Transcriptome

| PRJNA177922 | ENA

Tupaia belangeri

Project description:Tupaia belangeri Transcriptome or Gene expression

| PRJNA240268 | ENA

Identifying microRNAs and their editing sites in Macaca mulatta

Project description:MicroRNAs are small non-coding RNAs that are critical in post-transcriptional regulation. According to the latest miRBase (v22), there are 617 annotated pre-miRNAs in Macaca mulatta, which is much less than 1917 in human, although both of these two species are primates. To improve the annotation of miRNAs in Macaca mulatta, we generated 12 small RNA profiles from 8 tissues and perform comprehensive analysis of these profiles. We identified 613 conserved pre-miRNAs that have not been reported in Macaca mulatta and 25 novel miRNAs. Furthermore, we identified 996 editing sites with significant editing levels from 250 pre-miRNAs after analyzing the 12 self-generated and 58 additional published sRNA-seq profiles from different types of organs or tissues. Our results show that the distribution of different miRNA editing types in Macaca mulatta is different from that in human brains. Particularly, there are much more small indel events in miRNAs of Macaca mulatta than in human brains. These results significantly increase our understanding of miRNAs and their editing events in Macaca mulatta.

2019-08-27 | GSE124417 | GEO

Transcriptome sequencing of Chinese tree shrew, Tupaia belangeri chinensis

Project description:Deep sequencing of mRNA from Chinese tree shrew; Chinese tree shrew (Tupaia belangeri chinensis) is placed in Order Scandentia and embraces many unique features for a good experimental animal model. Currently, there are many attempts to employ tree shrew to establish model for a variety of human disorders such as social stress, myopia, HCV and HBV infection, and hepatocellular carcinoma .We present here a publicly available annotated genome sequence for Chinese tree shrew. Phylogenomic analysis of tree shrew and other mammalians highly supported its close affinity to primates. Characterization of key factors and signaling pathways of the nervous and immune systems in tree shrews showed that this animal had common and unique features, and had essential genetic basis for being a promising model for biomedical researches.

2013-01-14 | GSE39150 | GEO

Transcriptome sequencing of Chinese tree shrew, Tupaia belangeri chinensis

2013-01-14 | E-GEOD-39150 | biostudies-arrayexpress

Tupaia belangeri

Project description:Construction of complete Tupaia belangeri transcriptome database by whole-genome and comprehensive RNA sequencing.

| PRJDB7591 | ENA

Macaca mulatta

Project description:Macaca mulatta Exome

| PRJNA312983 | ENA