Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Proteobacteria

ABSTRACT: freshwater sediment Raw sequence reads

PROVIDER: PRJNA761187 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR15734400_1.fastq.gz	Fastqsanger.gz
	SRR15734400_2.fastq.gz	Fastqsanger.gz
	SRR15734401_1.fastq.gz	Fastqsanger.gz
	SRR15734401_2.fastq.gz	Fastqsanger.gz
	SRR15734402_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 95

Similar Datasets

LC-MS/MS of autotrophic culture KS, that performs nitrate reduction coupled to iron(II) oxidation (NDFO)

Project description:Nitrate-reducing iron(II)-oxidizing bacteria are widespread in the environment contribute to nitrate removal and influence the fate of the greenhouse gases nitrous oxide and carbon dioxide. The autotrophic growth of nitrate-reducing iron(II)-oxidizing bacteria is rarely investigated and poorly understood. The most prominent model system for this type of studies is enrichment culture KS, which originates from a freshwater sediment in Bremen, Germany. To gain insights in the metabolism of nitrate reduction coupled to iron(II) oxidation under in the absence of organic carbon and oxygen limited conditions, we performed metagenomic, metatranscriptomic and metaproteomic analyses of culture KS. Raw sequencing data of 16S rRNA amplicon sequencing, shotgun metagenomics (short reads: Illumina; long reads: Oxford Nanopore Technologies), metagenome assembly, raw sequencing data of shotgun metatranscriptomes (2 conditions, triplicates) can be found at SRA in https://www.ncbi.nlm.nih.gov/bioproject/PRJNA682552. This dataset contains proteomics data for 2 conditions (heterotrophic and autotrophic growth conditions) in triplicates.

2021-05-17 | PXD023186 | Pride

Morus alba Raw protein sequence reads

Project description:Morus alba L. Raw protein sequence reads and sequence

2024-02-08 | PXD049451 |

Proteobacteria

Project description:sediments Raw sequence reads

| PRJNA1080676 | ENA

Proteobacteria

Project description:Proteobacteria Raw sequence reads

| PRJNA326889 | ENA

Proteobacteria

Project description:which can induced corrosion Raw sequence reads