Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

Samsoniella hepiali strain:ascomycetes

ABSTRACT: Samsoniella hepiali strain:ascomycetes Transcriptome or Gene expression

PROVIDER: PRJNA765884 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16067169_1.fastq.gz	Fastqsanger.gz
	SRR16067169_2.fastq.gz	Fastqsanger.gz
	SRR16067170_1.fastq.gz	Fastqsanger.gz
	SRR16067170_2.fastq.gz	Fastqsanger.gz
	SRR16067171_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 12

Similar Datasets

Samsoniella hepiali

Project description:Samsoniella hepiali Transcriptome or Gene expression

| PRJNA203663 | ENA

Samsoniella hepiali strain:FENG

Project description:Samsoniella hepiali strain:FENG Genome sequencing and assembly

| PRJNA301665 | ENA

Samsoniella hepiali strain:ICMM 82-2

Project description:Samsoniella hepiali strain:ICMM 82-2 Genome sequencing

| PRJNA1033426 | ENA

Samsoniella hepiali

Project description:Paecilomyces hepiali overview

| PRJNA204957 | ENA

Samsoniella hepiali strain:FENG

Project description:Transcriptome of Paecilomyces hepiali

| PRJNA397526 | ENA

Identification of Ascomycetes from Argentina

Project description:This is an study about first report of ascomycetes from Argentina

| PRJEB23263 | ENA

Heat resistant ascomycetes from semi-arid soils from Argentina

Project description:Heat resistant ascomycetes from semi-arid soils from Argentina

| PRJEB23768 | ENA

Comparative xylose metabolism among the ascomycetes C. albicans, S. stipitis and S. cerevisiae

Project description:The ascomycetes Saccharomyces cerevisiae, Candida albicans and Scheffersomyces stipitis metabolize the pentose sugar xylose very differently. S. cerevisiae fails to grow on xylose, while C. albicans can grow, and S. stipitis can both grow and ferment xylose to ethanol. However, all three species contain highly similar genes that encode xylose reductase and xylitol dehydrogenase required to convert xylose to xylulose, on which all three fungi grow. We have created C. albicans strains deleted for either or both the xylose reductase gene GRE3, and the xylitol dehydrogenase gene XYL2. As expected, all the mutant strains cannot grow on xylose, while the gre3 mutant can grow on xylitol. The gre3 and xyl2 mutants are complemented efficiently by the XYL1 and XYL2 from S. stipitis respectively. Intriguingly, the S. cerevisiae GRE3 and SOR1 genes can complement the gre3 and xyl2 mutants respectively, showing that S. cerevisiae contains the enzymatic capacity for converting xylose to xylulose. In addition, the gre3 xyl2 double mutant is effectively rescued by the xylose isomerase (XI) gene of either Piromyces or Orpinomyces, suggesting that the XI provides an alternative to the missing oxido-reductase functions in the mutant required for the xylose-xylulose conversion. Overall this work establishes that C. albicans strains engineered to lack essential steps for xylose metabolism provide a platform for the analysis of xylose metabolism enzymes from a variety of species, and confirms that S. cerevisiae has the genetic potential to convert xylose to xylulose, although non-engineered strains cannot proliferate on xylose as the sole carbon source.

2013-10-30 | GSE50476 | GEO

Comparative xylose metabolism among the ascomycetes C. albicans, S. stipitis and S. cerevisiae

2013-10-30 | E-GEOD-50476 | biostudies-arrayexpress

Comparative xylose metabolism among the ascomycetes C. albicans, S. stipitis and S. cerevisiae

Project description:Comparative xylose metabolism among the ascomycetes C. albicans, S. stipitis and S. cerevisiae

| PRJNA217707 | ENA