Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: RNA-seq of rice in (-)-loliolide and jasmonic acid treatment

PROVIDER: PRJNA767712 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16145712_1.fastq.gz	Fastqsanger.gz
	SRR16145712_2.fastq.gz	Fastqsanger.gz
	SRR16145713_1.fastq.gz	Fastqsanger.gz
	SRR16145713_2.fastq.gz	Fastqsanger.gz
	SRR16145714_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 36

Similar Datasets

Jasmonic acid-responsive genes in rice leaves

2011-10-06 | GSE32634 | GEO

Jasmonic acid-responsive genes in suspension-cultured rice cells

2011-10-06 | GSE32633 | GEO

Jasmonic acid-responsive genes in rice

Project description:This SuperSeries is composed of the following subset Series: GSE32633: Jasmonic acid-responsive genes in suspension-cultured rice cells GSE32634: Jasmonic acid-responsive genes in rice leaves Refer to individual Series

2011-10-05 | E-GEOD-32635 | biostudies-arrayexpress

Effect of methyl jasmonate treatment on rice leaves of wild-type and rice COI mutatns

Project description:Analysis of leaves of wild-type and rice COI mutants treated with methyl jasmonate (MeJA). Results provide the role of rice COI on response to jasmonic acid.

2022-06-11 | GSE205750 | GEO

Rice global gene expression profile in response to plant hormones

2012-12-03 | GSE39429 | GEO

Project description:Jasmonic acid-responsive genes in rice

| PRJNA146977 | ENA

Project description:RNA-seq data of alfalfa with salt treatment and jasmonic acid

| PRJNA907206 | ENA

Jasmonic acid-responsive genes in rice leaves

Project description:Jasmonic acid (JA) is involved in various developmental processes and defense responses against abiotic and biotic stresses. We identified JA-responsive genes in rice leaves 6-48 h after treatment using rice 44k microarray. Expression profiling in rice leaves treated with JA for 6, 12, 24 and 48 h was compared with that in the corresponding mock control using two-color method with two biological replicates.

2011-10-05 | E-GEOD-32634 | biostudies-arrayexpress

Jasmonic acid-responsive genes in suspension-cultured rice cells

Project description:Jasmonic acid (JA) is involved in various developmental processes and defense responses against abiotic and biotic stresses. We identified JA-responsive genes in suspension-cultured rice cells 2-12 h after treatment using rice 44k microarray. Expression profiling in rice cells treated with JA for 2, 4, 6, 8 and 12 h was compared with that in untreated control using two-color method with two biological replicates.

2011-10-05 | E-GEOD-32633 | biostudies-arrayexpress

Rice global gene expression profile in response to plant hormones

Project description:A time course gene expression profiling of rice treated with various plant hormones (abscisic acid, gibberelin, auxin, brassinosteroid, cytokinin and jasmonic acid) was performed to obtain an overall signature of the rice transcriptome in response to each phytohormone. The transcriptome of rice seedlings treated with various plant hormones such as abscisic acid (ABA), gibberellic acid 3 (GA3), indole-3-acetic acid (IAA), brassinolide (BL), trans-zeatin (tZ), and jasmonic acid (JA) was characterized by microarray analysis. Seven-day old seedlings were transferred in culture solutions with specific hormones and in culture solution without hormone to serve as control (mock treatment). Root samples were collected and analyzed in three replicates at pretreatment (control) and after 15 min, 30 min, 1 h, 3 h and 6 h incubation in culture solutions with each hormone. Shoot samples were collected and analyzed in two replicates at pretreatment (control) and after 1 h, 3 h, 6 h and 12 h incubation culture solutions with each hormone. A total of 93 microarray data for root and 50 microarray data for shoot were obtained.

2012-12-03 | E-GEOD-39429 | biostudies-arrayexpress

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data