Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Whole-genome re-sequencing of three oaks species

PROVIDER: PRJNA769460 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16248100_1.fastq.gz	Fastqsanger.gz
	SRR16248100_2.fastq.gz	Fastqsanger.gz
	SRR16248101_1.fastq.gz	Fastqsanger.gz
	SRR16248101_2.fastq.gz	Fastqsanger.gz
	SRR16248102_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 202

Similar Datasets

A multicenter translational biomarker phase II trial of regorafenib in patients with non-resectable pretreated colorectal cancer.

Project description:Primary objectives: The primary objective is to investigate circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS). Primary endpoints: circulating tumor DNA (ctDNA) via deep sequencing for mutation detection and by whole genome sequencing for copy number analyses before start (baseline) with regorafenib and at defined time points during administration of regorafenib for treatment efficacy in colorectal cancer patients in terms of overall survival (OS).

| 2533916 | ecrin-mdr-crc

Project description:Whole genome resequencing data of three oaks in southwest China

| PRJNA614601 | ENA

Pooled Whole Genome Re-Sequencing of three chicken populations

Project description:Pooled Whole Genome Re-Sequencing of three chicken populations

| PRJEB31780 | ENA

Gossypium

Project description:Whole genome re-sequencing of allotetraploid cotton species

| PRJNA280597 | ENA

Project description:Whole genome re-sequencing of 65 Drosophila species

| PRJNA669609 | ENA

Functional roles of Aves class specific cis-regulatory elements on macroevolution of bird-specific features

Project description:We carried out a comparative genomic analysis of 48 avian species to identify avian-specific highly conserved elements (ASHCEs). We performed genome-wide chromatin immunoprecipitation sequencing (ChIP-seq) for three enhancer-associated histone modifications (H3K4me1, H3K27ac, H3K27me3), to investigate dynamic regulatory roles of ASHCEs in chicken development. We found that all three enhancer-associated histone marks are enriched in ASHCEs compared to the whole genome background.

2016-12-01 | GSE75480 | GEO

Sebastes spp.

Project description:Whole-genome sequencing data of three Sebastes species

| PRJNA507287 | ENA

Project description:Whole genome resequencing of three Broussonetia species

| PRJNA817344 | ENA

Project description:whole genome sequencing data of three marine fish species

| PRJNA1034949 | ENA

Revised annotation of Plutella xylostella microRNAs

Project description:We used our newly ultra deep sequence data and bioinformatics to re-annotate P. xylostella genome for high confidence miRNAs with the correct 5p and 3p arm features. Furthermore, the whole genome was screened to identify potential miRNA binding sites using three target-predicting algorithms. Totally, 203 mature miRNAs were annotated, including 33 novel miRNAs.

2016-08-01 | GSE76321 | GEO

OmicsDI is part of the ELIXIR infrastructure

OmicsDI is an Elixir interoperability service. Learn more ›

Tweets

OmicsDI Databases

PRIDE
PeptideAtlas
MassIVE
JPOST Repository
Physiome Model Repository

EGA
EVA
ENA
LINCS
PAXDB
Cell Collective

MetaboLights
Metabolomics Workbench
MetabolomeExpress
GNPS
BioModels
FAIRDOMHub

ArrayExpress
dbGaP
ExpressionAtlas
GEO
NODE

Information

Databases
Help
API
Contact us
Code on GitHub
Terms of use
Submit Data