Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

MicroRNA expression profile in the Laiwu black goat kid liver

ABSTRACT: MicroRNA expression profile in the Laiwu black goat kid liver

PROVIDER: PRJNA770352 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16292116.fastq.gz	Fastqsanger.gz
	SRR16292117.fastq.gz	Fastqsanger.gz
	SRR16292118.fastq.gz	Fastqsanger.gz
	SRR16292119.fastq.gz	Fastqsanger.gz
	SRR16292120.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 25

Similar Datasets

mRNA expression profile in the Laiwu black goat kid liver

Project description:Laiwu black goat kid liver mRNA expression profile were sequenced with novaSeq 6000. The liver tissues were procured at 5-time points from the Laiwu black goats of 1 day, 2 weeks, 4 weeks, 8 weeks, and 12 weeks of age, respectively with 5 goats per time point, for a total of 25 goats.

2022-01-28 | GSE194190 | GEO

mRNA expression profile in the Laiwu black goat kid liver

Project description:mRNA expression profile in the Laiwu black goat kid liver

| PRJNA799383 | ENA

MicroRNA expression profile in the Laiwu black goat kid liver

Project description:We sequenced the miRNAs in the liver tissues of goats to further enrich and elucidate the miRNA expression profile in their physiological cycle. The liver tissues were procured at 5-time points from the Laiwu black goats of 1 day, 2 weeks, 4 weeks, 8 weeks, and 12 weeks of age, respectively with 5 goats per time point, for a total of 25 goats. This study identified 1255 miRNAs.

2021-10-15 | GSE185667 | GEO

Skin transcriptome profiles associated with black- and white-coated region in a crossbred goat

Project description:we compared the skin transcriptomes of the black- and white-coated region from the Boer and Macheng Black crossbred goat with black head and white body using the Illumina RNA-Seq method. Six cDNA libraries derived from skin samples of the white coat region (n = 3) and black coat region (n = 3) were constructed from three full-sib goats. On average, we obtained approximately 76.5 and 73.5 million reads for each skin sample of black coat and white coat, respectively, of which 75.39% and 76.05% reads were covered in the genome database. Our study provides insight into the transcriptional regulation of two distinct coat color that might serve as a key resource for understanding coat color pigmentation of goat.

2022-08-18 | GSE135963 | GEO

Comparing the transcriptomes of ovaries from prolific Jintang black goat and non-prolific Tibetan goat (Capra hircus) during follicular phase

Project description:The present study, for the first time, compared the transcriptomes of ovaries from the prolific Jintang black goat and the non-prolific Tibetan goat during follicular phase using the Illumina RNA-Seq method. The study provides insight into the transcriptional regulation in the ovaries of two distinct breeds of goats that might serve as a key resource for understanding goat fecundity.

2017-11-22 | GSE87878 | GEO

Expression profiles of circRNAs in goat skeletal muscle development

Project description:To explore functional circRNAs during goat muscle development, we systematically investigated the circRNAs profiles using high throughput transcriptome sequencing technology (RNA-seq) at key developmental stages of fetus and Kid in Haimen goat.

2023-12-31 | GSE200971 | GEO

Identification of LncRNAs/circRNAs associated with testicular development and spermatogenesis in black goat

Project description:Establishment and maintenance of spermatogenesis need a complex process and vast regulatory network. There is growing evidence reveals that long noncoding RNAs (lncRNA) plays important role in regulating testicular development and spermatogenesis in a stage-specific way. We here report the identification of lncRNA LOC108635509 as key lncRNA regulator in black goat spermatogenesis. In the current study, we screened the transcriptomes (lncRNA and mRNA) of testicular from Guangxi black goats before puberty (3 days old, D3; 30 days old, D30), puberty (90 days old, D90) and postpuberty (180 days old, D180), and found there were 1211, 12180, 834 differential lncRNAs and 1196, 8838,269 differential mRNAs at the ages of D30 vs D3, D90 vs D30, and D180 vs D90. The expression pattern of differentially expressed (DE) lncRNAs indicated that D90 was a key node of lncRNAs participated in the regulation of testicular development and spermatogenesis in black goat. The of GO and KEGG analyses identified that DE lncRNAs and their target genes regulated spermatogenesis through MAPK, Ras, and PI3K-Akt signal pathways. Using cis- and trans-acting, 39 DE lncRNA-targeted genes were found to be enriched for male reproduction. Of these, LOC108635509, which specific expressed in testis and upregulated the expression levels at D90, was found participated in the regulation of testicular development through promoting the proliferation of SCs. Overall, this study provides new insight into the regulatory mechanisms that support spermatogenesis and testicular development in black goats.

2024-10-01 | GSE276236 | GEO

goat

Project description:Yunling black goat, Nubian goat Raw sequence reads

| PRJNA504493 | ENA

Capra hircus strain:Yunnan Black goat

Project description:Capra hircus strain:Yunnan Black goat Genome sequencing and assembly

| PRJNA158393 | ENA

Capra hircus strain:dazu black goat

Project description:Capra hircus strain:dazu black goat Transcriptome or Gene expression

| PRJNA259310 | ENA