Browse
Submit Data
Databases
API
Help

Dataset Information

0 Views

0 Connections

0 Citations

0 Reanalyses

0 Downloads

Omics score: 0

ABSTRACT: Wood mulch triggers positive plant-soil feedback in boreal forest through shifts in soil microbiome

PROVIDER: PRJNA775865 | ENA |

REPOSITORIES: ENA

ACCESS DATA

Json Xml

Dataset's files

Source:

			Action	DRS
	SRR16633100_1.fastq.gz	Fastqsanger.gz
	SRR16633100_2.fastq.gz	Fastqsanger.gz
	SRR16633200_1.fastq.gz	Fastqsanger.gz
	SRR16633200_2.fastq.gz	Fastqsanger.gz
	SRR16633300_1.fastq.gz	Fastqsanger.gz

Items per page:

1 - 5 of 922

Similar Datasets

SARST analysis of arctic soil samples

Project description:Analysis of microbial community composition in arctic tundra and boreal forest soils using serial analysis of ribosomal sequence tags (SARST). Keywords: other

2004-01-12 | GSE949 | GEO

Gene family expansions and transcriptome signatures uncover adaptations to wood decay in basidiomycetes fungi from the order Polyporales [Trametes ljubarskyi]

Project description:Because they comprise some of the most efficient wood-decayers, Polyporales fungi impact carbon cycling in forest environment. The transcriptomic trends of selected Polyporales species from the core polyporoid and phlebioid clades during degradation of diverse lignocellulosic substrates led to the discovery of conserved gene sets regulated for plant cell wall degradation. Our results unveil some of the mechanisms underlying Polyporales diversification and pinpoint to yet overlooked proteins that could contribute to the ability of Polyporales to degrade recalcitrant plant cell wall polymers.

2021-08-11 | GSE156166 | GEO

Gene family expansions and transcriptome signatures uncover adaptations to wood decay in basidiomycetes fungi from the order Polyporales [Leiotrametes sp.]

2021-08-11 | GSE156164 | GEO

Gene family expansions and transcriptome signatures uncover adaptations to wood decay in basidiomycetes fungi from the order Polyporales [Trametes elegans]

2021-08-11 | GSE156163 | GEO

Gene family expansions and transcriptome signatures uncover adaptations to wood decay in basidiomycetes fungi from the order Polyporales [Irpex lacteus]

2021-08-11 | GSE156899 | GEO

Annual Removal of Aboveground Plant Biomass Alters Soil Microbial Responses to Warming

Project description:Clipping (i.e., harvesting aboveground plant biomass) is common in agriculture and for bioenergy production. However, microbial responses to clipping in the context of climate warming are poorly understood. We investigated the interactive effects of grassland warming and clipping on soil properties, plant and microbial communities, in particular microbial functional genes. Clipping alone did not change the plant biomass production, but warming and clipping combined increased the C4 peak biomass by 47% and belowground net primary production by 110%. Clipping alone and in combination with warming decreased the soil carbon input from litter by 81% and 75%, respectively. With less carbon input, the abundances of genes involved in degrading relatively recalcitrant carbon increased by 38-137% in response to either clipping or the combined treatment, which could weaken the long-term soil carbon stability and trigger a positive feedback to warming. Clipping alone also increased the abundance of genes for nitrogen fixation, mineralization and denitrification by 32-39%. The potentially stimulated nitrogen fixation could help compensate for the 20% decline in soil ammonium caused by clipping alone, and contribute to unchanged plant biomass. Moreover, clipping tended to interact antagonistically with warming, especially on nitrogen cycling genes, demonstrating that single factor studies cannot predict multifactorial changes. These results revealed that clipping alone or in combination with warming altered soil and plant properties, as well as the abundance and structure of soil microbial functional genes. The aboveground biomass removal for biofuel production needs to be re-considered as the long-term soil carbon stability may be weakened.

2016-09-27 | GSE86527 | GEO

Identification of candidate genes affecting juvenile wood stiffness in Pinus radiata

Project description:Wood stiffness is the most important wood quality trait of forest trees for structural timber production. We investigated genes differentially transcribed in radiate pine trees with distinct wood stiffness using bulked segregant analysis (BSA) and cDNA microarrays. Transcript accumulation in earlywood (EW) and latewood (LW) of high (HS) and low stiffness (LS) trees in two progeny trials was compared.

2011-06-01 | GSE23020 | GEO

Project description:Plant-soil feedback-fungi

| PRJNA1217354 | ENA

Project description:Plant-soil feedback-Bacteria

| PRJNA1217353 | ENA

Gene family expansions and transcriptome signatures uncover adaptations to wood decay in basidiomycetes fungi from the order Polyporales

2021-08-11 | GSE156901 | GEO