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ABSTRACT: Theristicus caerulescens (Plumbeous ibis) genome, bTheCae1

PROVIDER: PRJNA776872 | ENA |

REPOSITORIES: ENA

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Dataset's files

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			Action	DRS
		Other
		Other
	SRR25658737_subreads.fastq.gz	Fastqsanger.gz
	SRR25658739_1.fastq.gz	Fastqsanger.gz
	SRR25658739_2.fastq.gz	Fastqsanger.gz

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Theristicus melanopis strain:NA

Project description:Theristicus melanopis

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Theristicus caudatus strain:NA

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Transcription profiling of Arabidopsis or Thlaspi caerulescens roots exposed to deficient, sufficient or excess zinc

Project description:A common reference model was used to design the microarray experiment, in which cDNA from T. caerulescens roots exposed to 100 uM (sufficient) zinc was used as the common reference. Every slide was always hybridized with the common reference sample and with a sample from one of the treatments (Arabidopsis or T. caerulescens exposed to deficient, sufficient or excess zinc). The common reference was labeled with the fluorescent dye Cyanine 3 (Cy3) and the treatment samples were labeled with Cyanine 5 (Cy5). As a quality control step we performed a dye-swap hybridization for one sample (from T. caerulescens roots exposed to sufficient zinc).

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